RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 MAGED2Q9UNF1 606 aaPredicted RBP23.31■■□□□ 1.32
SRRM1-222ENST00000596378 SCN10AQ9Y5Y9 1956 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 HAUS5O94927 633 aa23.3■■□□□ 1.32
SRRM1-222ENST00000596378 ALDOAP04075 364 aaKnown RBP23.3■■□□□ 1.32
SRRM1-222ENST00000596378 ERVK-10P10266 1014 aa23.3■■□□□ 1.32
SRRM1-222ENST00000596378 KITP10721 976 aa23.3■■□□□ 1.32
SRRM1-222ENST00000596378 CRHR1P34998 444 aa23.3■■□□□ 1.32
SRRM1-222ENST00000596378 GMPRP36959 345 aa23.3■■□□□ 1.32
SRRM1-222ENST00000596378 ZBTB16Q05516 673 aa23.3■■□□□ 1.32
SRRM1-222ENST00000596378 SIRPGQ9P1W8 387 aa23.3■■□□□ 1.32
SRRM1-222ENST00000596378 TPP1O14773 563 aa23.3■■□□□ 1.32
SRRM1-222ENST00000596378 BRCC3P46736 316 aa23.3■■□□□ 1.32
SRRM1-222ENST00000596378 UPP1Q16831 310 aa23.3■■□□□ 1.32
SRRM1-222ENST00000596378 TEX44Q53QW1 395 aa23.3■■□□□ 1.32
SRRM1-222ENST00000596378 ALYREFQ86V81 257 aaKnown RBP23.3■■□□□ 1.32
SRRM1-222ENST00000596378 NTAN1Q96AB6 310 aa23.3■■□□□ 1.32
SRRM1-222ENST00000596378 SLC9A7Q96T83 725 aa23.3■■□□□ 1.32
SRRM1-222ENST00000596378 PRDM16Q9HAZ2 1276 aa23.3■■□□□ 1.32
SRRM1-222ENST00000596378 IGSF9Q9P2J2 1179 aa23.3■■□□□ 1.32
SRRM1-222ENST00000596378 CDH9Q9ULB4 789 aa23.3■■□□□ 1.32
SRRM1-222ENST00000596378 MGEA5O60502 916 aa23.29■■□□□ 1.32
SRRM1-222ENST00000596378 FAM163BP0C2L3 166 aa23.29■■□□□ 1.32
SRRM1-222ENST00000596378 IFNL1Q8IU54 200 aa23.29■■□□□ 1.32
SRRM1-222ENST00000596378 ARID3BQ8IVW6 561 aaPredicted RBP23.29■■□□□ 1.32
SRRM1-222ENST00000596378 SOCS4Q8WXH5 440 aa23.29■■□□□ 1.32
SRRM1-222ENST00000596378 APBB2Q92870 758 aa23.29■■□□□ 1.32
SRRM1-222ENST00000596378 SMARCD1Q96GM5 515 aa23.29■■□□□ 1.32
SRRM1-222ENST00000596378 FCRL3Q96P31 734 aaPredicted RBP23.29■■□□□ 1.32
SRRM1-222ENST00000596378 COLEC11Q9BWP8 271 aa23.29■■□□□ 1.32
SRRM1-222ENST00000596378 MTO1Q9Y2Z2 717 aaKnown RBP23.29■■□□□ 1.32
SRRM1-222ENST00000596378 HTTP42858 3142 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 E2F8A0AVK6 867 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 MANSC4A6NHS7 340 aaPredicted RBP23.28■■□□□ 1.32
SRRM1-222ENST00000596378 C9IYK1 514 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 EZRP15311 586 aaKnown RBP23.28■■□□□ 1.32
SRRM1-222ENST00000596378 BDNFP23560 247 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 CD52P31358 61 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 GJA9P57773 515 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 SCAPQ12770 1279 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 HSF5Q4G112 596 aaPredicted RBP23.28■■□□□ 1.32
SRRM1-222ENST00000596378 CYS1Q717R9 158 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 RASSF3Q86WH2 238 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 FAM13CQ8NE31 585 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 MIPEPQ99797 713 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 TKTL2Q9H0I9 626 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 ARMCX1Q9P291 453 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 RPS6KL1Q9Y6S9 549 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 ZBTB24O43167 697 aaPredicted RBP23.28■■□□□ 1.32
SRRM1-222ENST00000596378 IL1BP01584 269 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 BPGMP07738 259 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 OCRLQ01968 901 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 ZBTB17Q13105 803 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 CDKL2Q92772 493 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 TMEM209Q96SK2 561 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 SAR1AQ9NR31 198 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 TMLHEQ9NVH6 421 aa23.28■■□□□ 1.32
SRRM1-222ENST00000596378 CAPN15O75808 1086 aa23.27■■□□□ 1.32
SRRM1-222ENST00000596378 PDE1CQ14123 709 aaPredicted RBP23.27■■□□□ 1.32
SRRM1-222ENST00000596378 SPDYAQ5MJ70 313 aa23.27■■□□□ 1.32
SRRM1-222ENST00000596378 TIFABQ6ZNK6 161 aa23.27■■□□□ 1.32
SRRM1-222ENST00000596378 RSPH3Q86UC2 560 aa23.27■■□□□ 1.32
SRRM1-222ENST00000596378 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.27■■□□□ 1.32
SRRM1-222ENST00000596378 ARHGAP39Q9C0H5 1083 aa23.27■■□□□ 1.32
SRRM1-222ENST00000596378 WDCPQ9H6R7 721 aa23.27■■□□□ 1.32
SRRM1-222ENST00000596378 EMCNQ9ULC0 261 aa23.27■■□□□ 1.32
SRRM1-222ENST00000596378 PTCH2Q9Y6C5 1203 aa23.27■■□□□ 1.32
SRRM1-222ENST00000596378 MRPL42Q9Y6G3 142 aaKnown RBP23.27■■□□□ 1.32
SRRM1-222ENST00000596378 B3GAT3O94766 335 aa23.27■■□□□ 1.32
SRRM1-222ENST00000596378 PTPN4P29074 926 aa23.27■■□□□ 1.32
SRRM1-222ENST00000596378 CD68P34810 354 aaPredicted RBP23.27■■□□□ 1.32
SRRM1-222ENST00000596378 CRHR2Q13324 411 aa23.27■■□□□ 1.32
SRRM1-222ENST00000596378 PPM1JQ5JR12 505 aa23.27■■□□□ 1.32
SRRM1-222ENST00000596378 ATG16L1Q676U5 607 aa23.27■■□□□ 1.32
SRRM1-222ENST00000596378 TAC4Q86UU9 113 aa23.27■■□□□ 1.32
SRRM1-222ENST00000596378 SERINC5Q86VE9 423 aa23.27■■□□□ 1.32
SRRM1-222ENST00000596378 PTCD3Q96EY7 689 aaKnown RBP23.27■■□□□ 1.32
SRRM1-222ENST00000596378 CELF6Q96J87 481 aaKnown RBP23.27■■□□□ 1.32
SRRM1-222ENST00000596378 C7orf26Q96N11 449 aa23.27■■□□□ 1.32
SRRM1-222ENST00000596378 APOL2Q9BQE5 337 aa23.27■■□□□ 1.32
SRRM1-222ENST00000596378 NMUR2Q9GZQ4 415 aa23.27■■□□□ 1.32
SRRM1-222ENST00000596378 OR12D3Q9UGF7 316 aa23.27■■□□□ 1.32
SRRM1-222ENST00000596378 GIT1Q9Y2X7 761 aa23.27■■□□□ 1.32
SRRM1-222ENST00000596378 F8W810 466 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 GSRP00390 522 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 ITGA2BP08514 1039 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 GM2AP17900 193 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 THPOP40225 353 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 RASSF2P50749 326 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 PPIDQ08752 370 aaKnown RBP23.26■■□□□ 1.31
SRRM1-222ENST00000596378 MGAT3Q09327 533 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 TRIM32Q13049 653 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 N4BP2L1Q5TBK1 243 aaPredicted RBP23.26■■□□□ 1.31
SRRM1-222ENST00000596378 ATXN7L3BQ96GX2 97 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 CHST12Q9NRB3 414 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 ZFATQ9P243 1243 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 LNPEPQ9UIQ6 1025 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 PADI3Q9ULW8 664 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 INPP5FQ9Y2H2 1132 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 BPTFQ12830 3046 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 FCHO1O14526 889 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms