RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 GTPBP4Q9BZE4 634 aaKnown RBP16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 PABPC3Q9H361 631 aaKnown RBP16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 CCDC86Q9H6F5 360 aaKnown RBP16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 DKK4Q9UBT3 224 aa16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 SMG1Q96Q15 3661 aaKnown RBP16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 MUC22E2RYF6 1773 aaPredicted RBP16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 KNTC1P50748 2209 aa16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 H0Y8X5 98 aa16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 M0QYV0 167 aa16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 FSBPO95073 299 aa16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 SMC2O95347 1197 aa16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 CD44P16070 742 aaKnown RBP16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 CSKP41240 450 aa16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 NNTQ13423 1086 aa16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 CAMK2BQ13554 666 aa16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 TTC31Q49AM3 519 aaPredicted RBP16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 FSCBQ5H9T9 825 aa16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 C9orf64Q5T6V5 341 aa16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 KIAA0895LQ68EN5 471 aa16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 LAYNQ6UX15 382 aa16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 BEND5Q7L4P6 421 aa16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 MFN1Q8IWA4 741 aa16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 HJURPQ8NCD3 748 aaPredicted RBP16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 EBF2Q9HAK2 575 aa16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 STIM2Q9P246 746 aa16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 SERGEFQ9UGK8 458 aa16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 SCML1Q9UN30 329 aa16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 CNTN6Q9UQ52 1028 aa16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 PLXNB3Q9ULL4 1909 aa16.5■□□□□ 0.23
GTF2F1-203ENST00000594213 P4HA2O15460 535 aa16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 TNFSF14O43557 240 aa16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 SIN3BO75182 1162 aa16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 ASLP04424 464 aa16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 GPD2P43304 727 aa16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 GALCP54803 685 aa16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 GCNT1Q02742 428 aa16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 MS4A13Q5J8X5 152 aa16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 TTI2Q6NXR4 508 aa16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 IGSF10Q6WRI0 2623 aa16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 ARHGEF19Q8IW93 802 aa16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 PPM1KQ8N3J5 372 aa16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 MDM1Q8TC05 714 aa16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 SMARCE1Q969G3 411 aa16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 DHTKD1Q96HY7 919 aaPredicted RBP16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 TIGD1Q96MW7 591 aa16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 DDX50Q9BQ39 737 aaKnown RBP16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 NUCKS1Q9H1E3 243 aaKnown RBP16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 ADAMTS1Q9UHI8 967 aa16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 NAALADL1Q9UQQ1 740 aa16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 TLR6Q9Y2C9 796 aa16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 GOLGA4Q13439 2230 aaKnown RBP16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 ASXL3Q9C0F0 2248 aa16.49■□□□□ 0.23
GTF2F1-203ENST00000594213 URB1O60287 2271 aaKnown RBP16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 A0A1W2PPC4 97 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 VILLO15195 856 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 BMP6P22004 513 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 CTSOP43234 321 aaPredicted RBP16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 GRK6P43250 576 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 CCT8P50990 548 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 RACK1P63244 317 aaKnown RBP16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 EIF4EBP2Q13542 120 aaPredicted RBP16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 KCNJ12Q14500 433 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 SMAD1Q15797 465 aaKnown RBP16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 DCAF6Q58WW2 860 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 FOXR2Q6PJQ5 311 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 C19orf48Q6RUI8 117 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 MMS22LQ6ZRQ5 1243 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 RRAGAQ7L523 313 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 MARCH9Q86YJ5 346 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 SCUBE3Q8IX30 993 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 ELOA2Q8IYF1 753 aaPredicted RBP16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 EHBP1Q8NDI1 1231 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 KREMEN1Q96MU8 473 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 SERPINB11Q96P15 392 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 FAM129BQ96TA1 746 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 MIS12Q9H081 205 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 NEUROG2Q9H2A3 272 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 FBXL12Q9NXK8 326 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 XPO7Q9UIA9 1087 aaKnown RBP16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 ERVW-1Q9UQF0 538 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 NCKAP1Q9Y2A7 1128 aa16.48■□□□□ 0.23
GTF2F1-203ENST00000594213 ITIH6Q6UXX5 1313 aa16.47■□□□□ 0.23
GTF2F1-203ENST00000594213 A0A1B0GTQ1 180 aa16.47■□□□□ 0.23
GTF2F1-203ENST00000594213 TARSL2A2RTX5 802 aaKnown RBP16.47■□□□□ 0.23
GTF2F1-203ENST00000594213 TTC34A8MYJ7 566 aa16.47■□□□□ 0.23
GTF2F1-203ENST00000594213 PSMA7O14818 248 aa16.47■□□□□ 0.23
GTF2F1-203ENST00000594213 MID1O15344 667 aa16.47■□□□□ 0.23
GTF2F1-203ENST00000594213 DFNA5O60443 496 aa16.47■□□□□ 0.23
GTF2F1-203ENST00000594213 IGLV3-25P01717 112 aa16.47■□□□□ 0.23
GTF2F1-203ENST00000594213 WNT1P04628 370 aa16.47■□□□□ 0.23
GTF2F1-203ENST00000594213 ST8SIA6P61647 398 aa16.47■□□□□ 0.23
GTF2F1-203ENST00000594213 CST6Q15828 149 aa16.47■□□□□ 0.23
GTF2F1-203ENST00000594213 PITRM1Q5JRX3 1037 aa16.47■□□□□ 0.23
GTF2F1-203ENST00000594213 SYPL2Q5VXT5 272 aa16.47■□□□□ 0.23
GTF2F1-203ENST00000594213 NCEH1Q6PIU2 408 aa16.47■□□□□ 0.23
GTF2F1-203ENST00000594213 DHX40Q8IX18 779 aaKnown RBP16.47■□□□□ 0.23
GTF2F1-203ENST00000594213 CFAP52Q8N1V2 620 aa16.47■□□□□ 0.23
GTF2F1-203ENST00000594213 STK32AQ8WU08 396 aa16.47■□□□□ 0.23
GTF2F1-203ENST00000594213 SLC4A5Q9BY07 1137 aa16.47■□□□□ 0.23
GTF2F1-203ENST00000594213 SLCO3A1Q9UIG8 710 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms