RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 CARNMT1Q8N4J0 409 aa23.5■■□□□ 1.35
SSBP4-203ENST00000593641 IGSF8Q969P0 613 aa23.5■■□□□ 1.35
SSBP4-203ENST00000593641 TTC17Q96AE7 1141 aa23.5■■□□□ 1.35
SSBP4-203ENST00000593641 FAM149B1Q96BN6 582 aa23.5■■□□□ 1.35
SSBP4-203ENST00000593641 ZSWIM1Q9BR11 485 aa23.5■■□□□ 1.35
SSBP4-203ENST00000593641 RSPH9Q9H1X1 276 aaPredicted RBP23.5■■□□□ 1.35
SSBP4-203ENST00000593641 ST7Q9NRC1 585 aa23.5■■□□□ 1.35
SSBP4-203ENST00000593641 TLR6Q9Y2C9 796 aa23.5■■□□□ 1.35
SSBP4-203ENST00000593641 BAHCC1Q9P281 2608 aa23.5■■□□□ 1.35
SSBP4-203ENST00000593641 TAF4O00268 1085 aa23.49■■□□□ 1.35
SSBP4-203ENST00000593641 CAPNS1P04632 268 aa23.49■■□□□ 1.35
SSBP4-203ENST00000593641 GCNT1Q02742 428 aa23.49■■□□□ 1.35
SSBP4-203ENST00000593641 NNTQ13423 1086 aa23.49■■□□□ 1.35
SSBP4-203ENST00000593641 ISM2Q6H9L7 571 aa23.49■■□□□ 1.35
SSBP4-203ENST00000593641 NADSYN1Q6IA69 706 aa23.49■■□□□ 1.35
SSBP4-203ENST00000593641 KLHL10Q6JEL2 608 aa23.49■■□□□ 1.35
SSBP4-203ENST00000593641 LRSAM1Q6UWE0 723 aa23.49■■□□□ 1.35
SSBP4-203ENST00000593641 RRAGAQ7L523 313 aa23.49■■□□□ 1.35
SSBP4-203ENST00000593641 DQX1Q8TE96 717 aaKnown RBP23.49■■□□□ 1.35
SSBP4-203ENST00000593641 FCRL2Q96LA5 508 aaPredicted RBP23.49■■□□□ 1.35
SSBP4-203ENST00000593641 TRIM62Q9BVG3 475 aa23.49■■□□□ 1.35
SSBP4-203ENST00000593641 PABPC3Q9H361 631 aaKnown RBP23.49■■□□□ 1.35
SSBP4-203ENST00000593641 MTG2Q9H4K7 406 aa23.49■■□□□ 1.35
SSBP4-203ENST00000593641 ADAMTS20P59510 1910 aa23.49■■□□□ 1.35
SSBP4-203ENST00000593641 FAM47DPA6NHR8 397 aa23.48■■□□□ 1.35
SSBP4-203ENST00000593641 MOCS3O95396 460 aa23.48■■□□□ 1.35
SSBP4-203ENST00000593641 MOCS2O96007 188 aaPredicted RBP23.48■■□□□ 1.35
SSBP4-203ENST00000593641 CALCAP01258 141 aa23.48■■□□□ 1.35
SSBP4-203ENST00000593641 GRK6P43250 576 aa23.48■■□□□ 1.35
SSBP4-203ENST00000593641 RPS24P62847 133 aaKnown RBP23.48■■□□□ 1.35
SSBP4-203ENST00000593641 HNRNPA1L2Q32P51 320 aaKnown RBP23.48■■□□□ 1.35
SSBP4-203ENST00000593641 KIAA0895LQ68EN5 471 aa23.48■■□□□ 1.35
SSBP4-203ENST00000593641 LAYNQ6UX15 382 aa23.48■■□□□ 1.35
SSBP4-203ENST00000593641 DHX40Q8IX18 779 aaKnown RBP23.48■■□□□ 1.35
SSBP4-203ENST00000593641 MYO19Q96H55 970 aa23.48■■□□□ 1.35
SSBP4-203ENST00000593641 LMLNQ96KR4 655 aa23.48■■□□□ 1.35
SSBP4-203ENST00000593641 NUCKS1Q9H1E3 243 aaKnown RBP23.48■■□□□ 1.35
SSBP4-203ENST00000593641 FBXL12Q9NXK8 326 aa23.48■■□□□ 1.35
SSBP4-203ENST00000593641 CEP83Q9Y592 693 aa23.48■■□□□ 1.35
SSBP4-203ENST00000593641 CELSR3Q9NYQ7 3312 aa23.47■■□□□ 1.35
SSBP4-203ENST00000593641 GOLGA8CPA6NN73 597 aa23.47■■□□□ 1.35
SSBP4-203ENST00000593641 CAPN9O14815 690 aa23.47■■□□□ 1.35
SSBP4-203ENST00000593641 SIN3BO75182 1162 aa23.47■■□□□ 1.35
SSBP4-203ENST00000593641 APOEP02649 317 aa23.47■■□□□ 1.35
SSBP4-203ENST00000593641 FYNP06241 537 aa23.47■■□□□ 1.35
SSBP4-203ENST00000593641 ATXN1LP0C7T5 689 aaKnown RBP23.47■■□□□ 1.35
SSBP4-203ENST00000593641 ACADSBP45954 432 aa23.47■■□□□ 1.35
SSBP4-203ENST00000593641 INAVAQ3KP66 663 aa23.47■■□□□ 1.35
SSBP4-203ENST00000593641 MS4A13Q5J8X5 152 aa23.47■■□□□ 1.35
SSBP4-203ENST00000593641 TMPRSS7Q7RTY8 843 aa23.47■■□□□ 1.35
SSBP4-203ENST00000593641 ARHGEF19Q8IW93 802 aa23.47■■□□□ 1.35
SSBP4-203ENST00000593641 SCUBE3Q8IX30 993 aa23.47■■□□□ 1.35
SSBP4-203ENST00000593641 KDM1BQ8NB78 822 aa23.47■■□□□ 1.35
SSBP4-203ENST00000593641 LMO3Q8TAP4 145 aa23.47■■□□□ 1.35
SSBP4-203ENST00000593641 ACE2Q9BYF1 805 aaPredicted RBP23.47■■□□□ 1.35
SSBP4-203ENST00000593641 TOR4AQ9NXH8 423 aa23.47■■□□□ 1.35
SSBP4-203ENST00000593641 MAN1B1Q9UKM7 699 aa23.47■■□□□ 1.35
SSBP4-203ENST00000593641 INTS6Q9UL03 887 aaKnown RBP23.47■■□□□ 1.35
SSBP4-203ENST00000593641 NAALADL1Q9UQQ1 740 aa23.47■■□□□ 1.35
SSBP4-203ENST00000593641 BTBD3Q9Y2F9 522 aa23.47■■□□□ 1.35
SSBP4-203ENST00000593641 BICDL2A1A5D9 508 aa23.46■■□□□ 1.35
SSBP4-203ENST00000593641 URB1O60287 2271 aaKnown RBP23.46■■□□□ 1.35
SSBP4-203ENST00000593641 PCDHGA12O60330 932 aa23.46■■□□□ 1.35
SSBP4-203ENST00000593641 LUC7L3O95232 432 aaKnown RBP23.46■■□□□ 1.35
SSBP4-203ENST00000593641 KRT5P13647 590 aa23.46■■□□□ 1.35
SSBP4-203ENST00000593641 CD44P16070 742 aaKnown RBP23.46■■□□□ 1.35
SSBP4-203ENST00000593641 C21orf59P57076 290 aa23.46■■□□□ 1.35
SSBP4-203ENST00000593641 CST6Q15828 149 aa23.46■■□□□ 1.35
SSBP4-203ENST00000593641 PITRM1Q5JRX3 1037 aa23.46■■□□□ 1.35
SSBP4-203ENST00000593641 RNF219Q5W0B1 726 aaPredicted RBP23.46■■□□□ 1.35
SSBP4-203ENST00000593641 TTI2Q6NXR4 508 aa23.46■■□□□ 1.35
SSBP4-203ENST00000593641 TAC4Q86UU9 113 aa23.46■■□□□ 1.35
SSBP4-203ENST00000593641 CFAP52Q8N1V2 620 aa23.46■■□□□ 1.35
SSBP4-203ENST00000593641 ADAM32Q8TC27 787 aa23.46■■□□□ 1.35
SSBP4-203ENST00000593641 SLC39A13Q96H72 371 aa23.46■■□□□ 1.35
SSBP4-203ENST00000593641 TJP2Q9UDY2 1190 aa23.46■■□□□ 1.35
SSBP4-203ENST00000593641 FASNP49327 2511 aaKnown RBP23.46■■□□□ 1.35
SSBP4-203ENST00000593641 A0A1W2PP55 124 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 LRRC72A6NJI9 287 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 H0Y8X5 98 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 KCNK3O14649 394 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 MID1O15344 667 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 TNFSF14O43557 240 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 DFNA5O60443 496 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 IGHV4-34P06331 123 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 SRPRAP08240 638 aaKnown RBP23.45■■□□□ 1.34
SSBP4-203ENST00000593641 GPD2P43304 727 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 RACK1P63244 317 aaKnown RBP23.45■■□□□ 1.34
SSBP4-203ENST00000593641 NUCB2P80303 420 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 DCAF6Q58WW2 860 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 FSCBQ5H9T9 825 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 MMS22LQ6ZRQ5 1243 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 GALNT15Q8N3T1 639 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 EHBP1Q8NDI1 1231 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 NELFBQ8WX92 580 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 SKA1Q96BD8 255 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 MYEOVQ96EZ4 313 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 MRGPRX3Q96LB0 322 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 OMDQ99983 421 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 CTNND2Q9UQB3 1225 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms