RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 PSMC3P17980 439 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 GPD1P21695 349 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 PSMA2P25787 234 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 GBP1P32455 592 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 FLT3P36888 993 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 ZNF143P52747 638 aaPredicted RBP12.32□□□□□ -0.44
DDX39A-219ENST00000592927 RWDD2BP57060 319 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 ZXDBP98169 803 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 PFKPQ01813 784 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 SRSF5Q13243 272 aaKnown RBP12.32□□□□□ -0.44
DDX39A-219ENST00000592927 PPP2R5DQ14738 602 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 ZNF77Q15935 545 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 STPG1Q5TH74 334 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 CCDC181Q5TID7 509 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 LRRC38Q5VT99 294 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 CC2D1AQ6P1N0 951 aaPredicted RBP12.32□□□□□ -0.44
DDX39A-219ENST00000592927 VITQ6UXI7 678 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 ZNF852Q6ZMS4 543 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 CREG2Q8IUH2 290 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 MFSD6LQ8IWD5 586 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 RHOT1Q8IXI2 618 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 EMC1Q8N766 993 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 C12orf50Q8NA57 414 aaPredicted RBP12.32□□□□□ -0.44
DDX39A-219ENST00000592927 ADAM32Q8TC27 787 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 ACTRT1Q8TDG2 376 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 DEPDC1BQ8WUY9 529 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 ZCCHC14Q8WYQ9 949 aaKnown RBP12.32□□□□□ -0.44
DDX39A-219ENST00000592927 ZFRQ96KR1 1074 aaKnown RBP12.32□□□□□ -0.44
DDX39A-219ENST00000592927 SERPINB11Q96P15 392 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 LRRC3BQ96PB8 259 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 CNPY3Q9BT09 278 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 CARD6Q9BX69 1037 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 ADAM33Q9BZ11 813 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 PLA2G2FQ9BZM2 168 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 TRIM7Q9C029 511 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 FAM204AQ9H8W3 233 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 TTC7AQ9ULT0 858 aaPredicted RBP12.32□□□□□ -0.44
DDX39A-219ENST00000592927 WASF3Q9UPY6 502 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 HBS1LQ9Y450 684 aaKnown RBP12.32□□□□□ -0.44
DDX39A-219ENST00000592927 E2F8A0AVK6 867 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 CTAGE15A4D2H0 777 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 C2CD4BA6NLJ0 364 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 M0QYT0 321 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 MSI1O43347 362 aaKnown RBP12.31□□□□□ -0.44
DDX39A-219ENST00000592927 SRGAP2O75044 1071 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 RNF8O76064 485 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 TRUB2O95900 331 aaKnown RBP12.31□□□□□ -0.44
DDX39A-219ENST00000592927 TOP3BO95985 862 aaKnown RBP12.31□□□□□ -0.44
DDX39A-219ENST00000592927 CTAGE8P0CG41 777 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 PDGFRAP16234 1089 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 SDC4P31431 198 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 SULT1E1P49888 294 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 PEX5P50542 639 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 TBX4P57082 545 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 USP4Q13107 963 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 NNTQ13423 1086 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 GRM2Q14416 872 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 TRIP4Q15650 581 aaPredicted RBP12.31□□□□□ -0.44
DDX39A-219ENST00000592927 CCDC6Q16204 474 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 HADHQ16836 314 aaKnown RBP12.31□□□□□ -0.44
DDX39A-219ENST00000592927 SLC25A52Q3SY17 297 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 POLNQ7Z5Q5 900 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 CTAGE6Q86UF2 777 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 TAC4Q86UU9 113 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 CTAGE4Q8IX94 777 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 RASGEF1CQ8N431 466 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 JOSD2Q8TAC2 188 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 COG1Q8WTW3 980 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 RXFP2Q8WXD0 754 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 GATA6Q92908 595 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 PLD4Q96BZ4 506 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 NAP1L3Q99457 506 aaPredicted RBP12.31□□□□□ -0.44
DDX39A-219ENST00000592927 TRMT61BQ9BVS5 477 aaKnown RBP12.31□□□□□ -0.44
DDX39A-219ENST00000592927 DDIT4Q9NX09 232 aa12.31□□□□□ -0.44
DDX39A-219ENST00000592927 LSM7Q9UK45 103 aaKnown RBP12.31□□□□□ -0.44
DDX39A-219ENST00000592927 MRPS17Q9Y2R5 130 aaKnown RBP12.31□□□□□ -0.44
DDX39A-219ENST00000592927 ASH1LQ9NR48 2969 aaKnown RBP12.3□□□□□ -0.44
DDX39A-219ENST00000592927 OBSL1O75147 1896 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 SYNJ2BP-COX16A0A087WUM0 186 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 EFCAB8A8MWE9 144 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 PGRMC1O00264 195 aaKnown RBP12.3□□□□□ -0.44
DDX39A-219ENST00000592927 SLC9A3R1O14745 358 aaPredicted RBP12.3□□□□□ -0.44
DDX39A-219ENST00000592927 STC2O76061 302 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 KRT7P08729 469 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 GDI1P31150 447 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 CXCR5P32302 372 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 PCK1P35558 622 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 CETN2P41208 172 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 PTPN9P43378 593 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 HARS2P49590 506 aaKnown RBP12.3□□□□□ -0.44
DDX39A-219ENST00000592927 PITX1P78337 314 aaPredicted RBP12.3□□□□□ -0.44
DDX39A-219ENST00000592927 OGDHQ02218 1023 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 DEUP1Q05D60 604 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 ZNF252P-AS1Q0IIN9 211 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 FCHO2Q0JRZ9 810 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 NME3Q13232 169 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 SEL1L2Q5TEA6 688 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 TRNP1Q6NT89 227 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 MAMSTRQ6ZN01 415 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 SND1Q7KZF4 910 aaKnown RBP eCLIP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms