RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 SAP30LQ9HAJ7 183 aa6.99□□□□□ -1.29
VMP1-215ENST00000592619 SNX15Q9NRS6 342 aa6.99□□□□□ -1.29
VMP1-215ENST00000592619 TBC1D22BQ9NU19 505 aa6.99□□□□□ -1.29
VMP1-215ENST00000592619 BLOC1S4Q9NUP1 217 aa6.99□□□□□ -1.29
VMP1-215ENST00000592619 SMPD4Q9NXE4 827 aa6.99□□□□□ -1.29
VMP1-215ENST00000592619 RAB21Q9UL25 225 aa6.99□□□□□ -1.29
VMP1-215ENST00000592619 ARHGAP26Q9UNA1 814 aa6.99□□□□□ -1.29
VMP1-215ENST00000592619 RCE1Q9Y256 329 aa6.99□□□□□ -1.29
VMP1-215ENST00000592619 RTEL1-TNFRSF6BF6WH68 1400 aa6.99□□□□□ -1.29
VMP1-215ENST00000592619 C9orf84Q5VXU9 1444 aa6.99□□□□□ -1.29
VMP1-215ENST00000592619 ATP10AO60312 1499 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 SHANK2Q9UPX8 1470 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 DNMT1P26358 1616 aaKnown RBP6.98□□□□□ -1.29
VMP1-215ENST00000592619 CYP3A7-CYP3A51PA0A087WV96 503 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 AP4M1O00189 453 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 CES2O00748 559 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 TCERG1O14776 1098 aaKnown RBP6.98□□□□□ -1.29
VMP1-215ENST00000592619 KLK10O43240 276 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 TMEM63AO94886 807 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 MYCLP12524 364 aaPredicted RBP6.98□□□□□ -1.29
VMP1-215ENST00000592619 CYP3A7P24462 503 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 RCAN1P53805 252 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 TXNL4AP83876 142 aaKnown RBP6.98□□□□□ -1.29
VMP1-215ENST00000592619 RNASELQ05823 741 aaKnown RBP6.98□□□□□ -1.29
VMP1-215ENST00000592619 LIPMQ5VYY2 423 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 WDR93Q6P2C0 686 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 CFAP161Q6P656 301 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 RNF207Q6ZRF8 634 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 ZNF551Q7Z340 670 aaPredicted RBP6.98□□□□□ -1.29
VMP1-215ENST00000592619 ANKRD44Q8N8A2 993 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 LINS1Q8NG48 757 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 CACTINQ8WUQ7 758 aaKnown RBP6.98□□□□□ -1.29
VMP1-215ENST00000592619 ZUFSPQ96AP4 578 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 PRR11Q96HE9 360 aaPredicted RBP6.98□□□□□ -1.29
VMP1-215ENST00000592619 NEUROD6Q96NK8 337 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 C1QTNF3Q9BXJ4 246 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 CDCP1Q9H5V8 836 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 ARHGEF3Q9NR81 526 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 SERTAD4Q9NUC0 356 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 ANKFY1Q9P2R3 1169 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 NOL7Q9UMY1 257 aaKnown RBP6.98□□□□□ -1.29
VMP1-215ENST00000592619 YEATS2Q9ULM3 1422 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 PLXNC1O60486 1568 aa6.98□□□□□ -1.29
VMP1-215ENST00000592619 AGLP35573 1532 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 AGAP5A6NIR3 686 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 C3orf70A6NLC5 250 aaPredicted RBP6.97□□□□□ -1.29
VMP1-215ENST00000592619 CSF1P09603 554 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 CPA1P15085 419 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 ITPKBP27987 946 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 DUSP1P28562 367 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 PGM1P36871 562 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 DIO1P49895 249 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 CCDC15Q0P6D6 951 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 TBL3Q12788 808 aaKnown RBP6.97□□□□□ -1.29
VMP1-215ENST00000592619 THOC5Q13769 683 aaKnown RBP6.97□□□□□ -1.29
VMP1-215ENST00000592619 CDSNQ15517 529 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 BCORL1Q5H9F3 1711 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 ANKRD16Q6P6B7 361 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 SFTPA1Q8IWL2 248 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 PALM2Q8IXS6 379 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 AFAP1Q8N556 730 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 ABHD11Q8NFV4 315 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 ARRDC3Q96B67 414 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 RNF125Q96EQ8 232 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 RBM17Q96I25 401 aaKnown RBP6.97□□□□□ -1.29
VMP1-215ENST00000592619 C20orf173Q96LM9 149 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 PLEKHG4BQ96PX9 1271 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 HERC2P3Q9BVR0 1158 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 SIGLEC1Q9BZZ2 1709 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 ARHGAP39Q9C0H5 1083 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 PRDM13Q9H4Q3 707 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 ACAD9Q9H845 621 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 OLA1Q9NTK5 396 aaKnown RBP6.97□□□□□ -1.29
VMP1-215ENST00000592619 DLL3Q9NYJ7 618 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 RAPGEFL1Q9UHV5 662 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 CCNL1Q9UK58 526 aaPredicted RBP6.97□□□□□ -1.29
VMP1-215ENST00000592619 GDAQ9Y2T3 454 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 TSC22D4Q9Y3Q8 395 aa6.97□□□□□ -1.29
VMP1-215ENST00000592619 SPAG9O60271 1321 aaKnown RBP6.97□□□□□ -1.29
VMP1-215ENST00000592619 ZNF644Q9H582 1327 aaPredicted RBP6.97□□□□□ -1.29
VMP1-215ENST00000592619 RNASEH2AO75792 299 aaKnown RBP6.96□□□□□ -1.3
VMP1-215ENST00000592619 MBPP02686 304 aaPredicted RBP6.96□□□□□ -1.3
VMP1-215ENST00000592619 C1SP09871 688 aa6.96□□□□□ -1.3
VMP1-215ENST00000592619 NR2F6P10588 404 aa6.96□□□□□ -1.3
VMP1-215ENST00000592619 IGFBP2P18065 325 aa6.96□□□□□ -1.3
VMP1-215ENST00000592619 TAS2R50P59544 299 aa6.96□□□□□ -1.3
VMP1-215ENST00000592619 LRRC24Q50LG9 513 aa6.96□□□□□ -1.3
VMP1-215ENST00000592619 SPDYAQ5MJ70 313 aa6.96□□□□□ -1.3
VMP1-215ENST00000592619 TTLL10Q6ZVT0 673 aa6.96□□□□□ -1.3
VMP1-215ENST00000592619 MRGPREQ86SM8 312 aa6.96□□□□□ -1.3
VMP1-215ENST00000592619 C12orf76Q8N812 135 aaPredicted RBP6.96□□□□□ -1.3
VMP1-215ENST00000592619 STAMQ92783 540 aa6.96□□□□□ -1.3
VMP1-215ENST00000592619 SNX18Q96RF0 628 aa6.96□□□□□ -1.3
VMP1-215ENST00000592619 FUZQ9BT04 418 aa6.96□□□□□ -1.3
VMP1-215ENST00000592619 THAP7Q9BT49 309 aaPredicted RBP6.96□□□□□ -1.3
VMP1-215ENST00000592619 KRTAP3-1Q9BYR8 98 aa6.96□□□□□ -1.3
VMP1-215ENST00000592619 WDR11Q9BZH6 1224 aa6.96□□□□□ -1.3
VMP1-215ENST00000592619 TAOK3Q9H2K8 898 aa6.96□□□□□ -1.3
VMP1-215ENST00000592619 PDE11AQ9HCR9 933 aa6.96□□□□□ -1.3
VMP1-215ENST00000592619 DUSP22Q9NRW4 184 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms