RNA–Protein interactions for RNA: ENST00000592208.5

RAVER1-204, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 1 (best)

Gene RAVER1, Length 4,693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-204ENST00000592208 YBX3P16989 372 aaKnown RBP eCLIP14.96□□□□□ -0.015e-7■■□□□ 12.5
RAVER1-204ENST00000592208 CD52P31358 61 aa14.96□□□□□ -0.01
RAVER1-204ENST00000592208 BMT2Q1RMZ1 405 aa14.96□□□□□ -0.01
RAVER1-204ENST00000592208 AMIGO3Q86WK7 504 aa14.96□□□□□ -0.01
RAVER1-204ENST00000592208 SCUBE3Q8IX30 993 aa14.96□□□□□ -0.01
RAVER1-204ENST00000592208 YIPF3Q9GZM5 350 aa14.96□□□□□ -0.01
RAVER1-204ENST00000592208 POLR1EQ9GZS1 481 aaKnown RBP14.96□□□□□ -0.01
RAVER1-204ENST00000592208 THAP1Q9NVV9 213 aa14.96□□□□□ -0.01
RAVER1-204ENST00000592208 DNAJC16Q9Y2G8 782 aa14.96□□□□□ -0.01
RAVER1-204ENST00000592208 ZSCAN5CA6NGD5 496 aaPredicted RBP14.96□□□□□ -0.02
RAVER1-204ENST00000592208 SPATA31C1P0DKV0 1188 aa14.96□□□□□ -0.02
RAVER1-204ENST00000592208 BDNFP23560 247 aa14.96□□□□□ -0.02
RAVER1-204ENST00000592208 GRK4P32298 578 aa14.96□□□□□ -0.02
RAVER1-204ENST00000592208 CAPZA2P47755 286 aa14.96□□□□□ -0.02
RAVER1-204ENST00000592208 CLK1P49759 484 aaKnown RBP14.96□□□□□ -0.02
RAVER1-204ENST00000592208 CORO7P57737 925 aa14.96□□□□□ -0.02
RAVER1-204ENST00000592208 PKN2Q16513 984 aaKnown RBP14.96□□□□□ -0.02
RAVER1-204ENST00000592208 TRMT5Q32P41 509 aaKnown RBP14.96□□□□□ -0.02
RAVER1-204ENST00000592208 ATP6AP1LQ52LC2 224 aa14.96□□□□□ -0.02
RAVER1-204ENST00000592208 WDR59Q6PJI9 974 aa14.96□□□□□ -0.02
RAVER1-204ENST00000592208 B4GALNT2Q8NHY0 566 aa14.96□□□□□ -0.02
RAVER1-204ENST00000592208 MAGEC3Q8TD91 643 aa14.96□□□□□ -0.02
RAVER1-204ENST00000592208 TLR10Q9BXR5 811 aa14.96□□□□□ -0.02
RAVER1-204ENST00000592208 SYNDIG1Q9H7V2 258 aa14.96□□□□□ -0.02
RAVER1-204ENST00000592208 KLHL28Q9NXS3 571 aa14.96□□□□□ -0.02
RAVER1-204ENST00000592208 GGT7Q9UJ14 662 aa14.96□□□□□ -0.02
RAVER1-204ENST00000592208 DNPEPQ9ULA0 475 aa14.96□□□□□ -0.02
RAVER1-204ENST00000592208 ST3GAL5Q9UNP4 418 aa14.96□□□□□ -0.02
RAVER1-204ENST00000592208 NAALADL1Q9UQQ1 740 aa14.96□□□□□ -0.02
RAVER1-204ENST00000592208 AP4S1Q9Y587 144 aa14.96□□□□□ -0.02
RAVER1-204ENST00000592208 TNPO3Q9Y5L0 923 aaKnown RBP14.96□□□□□ -0.02
RAVER1-204ENST00000592208 COL1A2P08123 1366 aa14.96□□□□□ -0.02
RAVER1-204ENST00000592208 AHDC1Q5TGY3 1603 aaPredicted RBP14.96□□□□□ -0.02
RAVER1-204ENST00000592208 KATNA1O75449 491 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 PTPN1P18031 435 aaKnown RBP14.95□□□□□ -0.02
RAVER1-204ENST00000592208 CES1P23141 567 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 PPP2R1BP30154 601 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 MIPP30301 263 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 KHDRBS2Q5VWX1 349 aaKnown RBP14.95□□□□□ -0.02
RAVER1-204ENST00000592208 VPS50Q96JG6 964 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 ATXN3LQ9H3M9 355 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 ROBO3Q96MS0 1386 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 QSOX1O00391 747 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 UBDO15205 165 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 RIPK2O43353 540 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 USP1O94782 785 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 ACADMP11310 421 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 ATP5C1P36542 298 aaKnown RBP14.95□□□□□ -0.02
RAVER1-204ENST00000592208 LRRC8DQ7L1W4 858 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 UPF1Q92900 1129 aaKnown RBP eCLIP14.95□□□□□ -0.025e-11■■■■□ 21.6
RAVER1-204ENST00000592208 PPP1R10Q96QC0 940 aaKnown RBP14.95□□□□□ -0.02
RAVER1-204ENST00000592208 SHPRHQ149N8 1683 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 DAB1O75553 588 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 NFICP08651 508 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 AIF1P55008 147 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 NFYCQ13952 458 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 ZNF544Q6NX49 715 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 POLNQ7Z5Q5 900 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 KCNMB4Q86W47 210 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 TERB1Q8NA31 727 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 KAT5Q92993 513 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 POP5Q969H6 163 aaKnown RBP14.95□□□□□ -0.02
RAVER1-204ENST00000592208 IL22Q9GZX6 179 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 BTBD7Q9P203 1132 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 SIK3Q9Y2K2 1263 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 SKAP2O75563 359 aaPredicted RBP14.95□□□□□ -0.02
RAVER1-204ENST00000592208 SEC24DO94855 1032 aaPredicted RBP14.95□□□□□ -0.02
RAVER1-204ENST00000592208 EPB42P16452 691 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 KCNA3P22001 575 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 ELK3P41970 407 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 DLG4P78352 724 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 BCL2L1Q07817 233 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 DDX39BQ13838 428 aaKnown RBP14.95□□□□□ -0.02
RAVER1-204ENST00000592208 CYP51A1Q16850 503 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 PPM1LQ5SGD2 360 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 MFSD7Q6UXD7 560 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 SCUBE1Q8IWY4 988 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 OR56A4Q8NGH8 313 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 MDM1Q8TC05 714 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 APOPT1Q96IL0 206 aa14.95□□□□□ -0.02
RAVER1-204ENST00000592208 SF3B1O75533 1304 aaKnown RBP eCLIP14.94□□□□□ -0.024e-8■■■■■ 64.8
RAVER1-204ENST00000592208 FAM208AQ9UK61 1670 aaKnown RBP14.94□□□□□ -0.02
RAVER1-204ENST00000592208 WDR47O94967 919 aa14.94□□□□□ -0.02
RAVER1-204ENST00000592208 PURAQ00577 322 aaKnown RBP14.94□□□□□ -0.02
RAVER1-204ENST00000592208 SGCGQ13326 291 aa14.94□□□□□ -0.02
RAVER1-204ENST00000592208 CSHL1Q14406 222 aa14.94□□□□□ -0.02
RAVER1-204ENST00000592208 IL17AQ16552 155 aa14.94□□□□□ -0.02
RAVER1-204ENST00000592208 EEF1DP3Q658K8 133 aa14.94□□□□□ -0.02
RAVER1-204ENST00000592208 WSCD1Q658N2 575 aa14.94□□□□□ -0.02
RAVER1-204ENST00000592208 PHACTR4Q8IZ21 702 aa14.94□□□□□ -0.02
RAVER1-204ENST00000592208 TMEM199Q8N511 208 aa14.94□□□□□ -0.02
RAVER1-204ENST00000592208 ZCCHC9Q8N567 271 aaKnown RBP14.94□□□□□ -0.02
RAVER1-204ENST00000592208 ADAM32Q8TC27 787 aa14.94□□□□□ -0.02
RAVER1-204ENST00000592208 EPS8L1Q8TE68 723 aa14.94□□□□□ -0.02
RAVER1-204ENST00000592208 CCT7Q99832 543 aa14.94□□□□□ -0.02
RAVER1-204ENST00000592208 RAD21L1Q9H4I0 556 aa14.94□□□□□ -0.02
RAVER1-204ENST00000592208 TBC1D23Q9NUY8 699 aa14.94□□□□□ -0.02
RAVER1-204ENST00000592208 A0A1B0GW55 424 aa14.94□□□□□ -0.02
RAVER1-204ENST00000592208 E2F8A0AVK6 867 aa14.94□□□□□ -0.02
RAVER1-204ENST00000592208 RNF103O00237 685 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms