RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 SLC2A11Q9BYW1 496 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 TPSD1Q9BZJ3 242 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 CIPCQ9C0C6 399 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 MTG2Q9H4K7 406 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 ELOVL2Q9NXB9 296 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 RRN3Q9NYV6 651 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 ADAMTS1Q9UHI8 967 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 GGA2Q9UJY4 613 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 NUMA1Q14980 2115 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 A0A087X0T9 212 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 PROB1E7EW31 1015 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 FAM72CH0Y354 149 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 CCP110O43303 1012 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 LUC7L3O95232 432 aaKnown RBP11.9□□□□□ -0.5
VMP1-211ENST00000591315 APBB3O95704 486 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 SERPING1P05155 500 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 FAM228BP0C875 321 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 SLC2A3P11169 496 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 HLA-EP13747 358 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 HOXB2P14652 356 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 PRKCHP24723 683 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 MZF1P28698 734 aaPredicted RBP11.9□□□□□ -0.5
VMP1-211ENST00000591315 NTSR1P30989 418 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 SDC4P31431 198 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 RDXP35241 583 aaKnown RBP11.9□□□□□ -0.5
VMP1-211ENST00000591315 EIF4A3P38919 411 aaKnown RBP11.9□□□□□ -0.5
VMP1-211ENST00000591315 PTPN9P43378 593 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 MRE11P49959 708 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 ADKP55263 362 aaKnown RBP11.9□□□□□ -0.5
VMP1-211ENST00000591315 ZNF252P-AS1Q0IIN9 211 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 MAMLD1Q13495 774 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 ZNF234Q14588 700 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 ALFQ53S48 1182 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 MPP7Q5T2T1 576 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 FAM72AQ5TYM5 149 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 MBLAC2Q68D91 279 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 FAM72DQ6L9T8 149 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 TMC6Q7Z403 805 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 WDR5BQ86VZ2 330 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 LONP2Q86WA8 852 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 FAM72BQ86X60 149 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 APCDD1Q8J025 514 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 CCAR2Q8N163 923 aaKnown RBP11.9□□□□□ -0.5
VMP1-211ENST00000591315 FRMD1Q8N878 549 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.9□□□□□ -0.5
VMP1-211ENST00000591315 SUMF1Q8NBK3 374 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 MDGA1Q8NFP4 955 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 TSTD1Q8NFU3 115 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 FIBINQ8TAL6 211 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 CENPIQ92674 756 aaPredicted RBP11.9□□□□□ -0.5
VMP1-211ENST00000591315 RPRD1AQ96P16 312 aaPredicted RBP11.9□□□□□ -0.5
VMP1-211ENST00000591315 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.9□□□□□ -0.5
VMP1-211ENST00000591315 IRF2BPLQ9H1B7 796 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 CD248Q9HCU0 757 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 CD93Q9NPY3 652 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 MPP6Q9NZW5 540 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 THAP10Q9P2Z0 257 aaPredicted RBP11.9□□□□□ -0.5
VMP1-211ENST00000591315 MYO1AQ9UBC5 1043 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 SLC12A6Q9UHW9 1150 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 PCDHGA2Q9Y5H1 932 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.9□□□□□ -0.5
VMP1-211ENST00000591315 STON1Q9Y6Q2 735 aa11.9□□□□□ -0.5
VMP1-211ENST00000591315 CKAP5Q14008 2032 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 LAMA1P25391 3075 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 DMXL1Q9Y485 3027 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 TCRBV21S2A2A0A5A6 115 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 PRR23AA6NEV1 266 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 H0Y626 953 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 AXIN1O15169 862 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 RTN2O75298 545 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 F9P00740 461 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 TPM3P06753 285 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 GZMAP12544 262 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 HOXA6P31267 233 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 ADRA1BP35368 520 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 CSKP41240 450 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 DGKEP52429 567 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 TBX2Q13207 712 aaPredicted RBP11.89□□□□□ -0.51
VMP1-211ENST00000591315 CDH18Q13634 790 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 PTPRNQ16849 979 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 EOGTQ5NDL2 527 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 BRMS1LQ5PSV4 323 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 DAB2IPQ5VWQ8 1189 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 PLEKHA7Q6IQ23 1121 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 CXorf57Q6NSI4 855 aaKnown RBP11.89□□□□□ -0.51
VMP1-211ENST00000591315 SARM1Q6SZW1 724 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 SND1Q7KZF4 910 aaKnown RBP eCLIP11.89□□□□□ -0.518e-10■■□□□ 13.1
VMP1-211ENST00000591315 DCLK2Q8N568 766 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 FAM160A2Q8N612 972 aaPredicted RBP11.89□□□□□ -0.51
VMP1-211ENST00000591315 ARFGAP1Q8N6T3 406 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 HMGB4Q8WW32 186 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 RLN3Q8WXF3 142 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 NKD2Q969F2 451 aaPredicted RBP11.89□□□□□ -0.51
VMP1-211ENST00000591315 ZNF653Q96CK0 615 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 ARHGEF26Q96DR7 871 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 CHP1Q99653 195 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 GABRG3Q99928 467 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 TRIM5Q9C035 493 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 ISCUQ9H1K1 167 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 CNOT8Q9UFF9 292 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms