RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 LRRC31Q6UY01 552 aa16.96■□□□□ 0.31
DNMT1-221ENST00000589538 PRR23BQ6ZRT6 265 aa16.96■□□□□ 0.31
DNMT1-221ENST00000589538 ZNF571Q7Z3V5 609 aaPredicted RBP16.96■□□□□ 0.31
DNMT1-221ENST00000589538 ADIPOR2Q86V24 386 aa16.96■□□□□ 0.31
DNMT1-221ENST00000589538 CFAP52Q8N1V2 620 aa16.96■□□□□ 0.31
DNMT1-221ENST00000589538 EMC1Q8N766 993 aa16.96■□□□□ 0.31
DNMT1-221ENST00000589538 MDGA1Q8NFP4 955 aa16.96■□□□□ 0.31
DNMT1-221ENST00000589538 CPLX3Q8WVH0 158 aa16.96■□□□□ 0.31
DNMT1-221ENST00000589538 ACOX2Q99424 681 aa16.96■□□□□ 0.31
DNMT1-221ENST00000589538 ADAM33Q9BZ11 813 aa16.96■□□□□ 0.31
DNMT1-221ENST00000589538 SIK2Q9H0K1 926 aa16.96■□□□□ 0.31
DNMT1-221ENST00000589538 ZDHHC4Q9NPG8 344 aa16.96■□□□□ 0.31
DNMT1-221ENST00000589538 CACNA2D2Q9NY47 1150 aa16.96■□□□□ 0.31
DNMT1-221ENST00000589538 CALCOCO1Q9P1Z2 691 aa16.96■□□□□ 0.31
DNMT1-221ENST00000589538 GMEB2Q9UKD1 530 aa16.96■□□□□ 0.31
DNMT1-221ENST00000589538 HS3ST4Q9Y661 456 aa16.96■□□□□ 0.31
DNMT1-221ENST00000589538 VPS13AQ96RL7 3174 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.95■□□□□ 0.3
DNMT1-221ENST00000589538 A0A1W2PQF6 199 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 RTN2O75298 545 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 CLDN11O75508 207 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 DLDP09622 509 aaKnown RBP16.95■□□□□ 0.3
DNMT1-221ENST00000589538 GPD1P21695 349 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 WASP42768 502 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 ATP11AP98196 1134 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 LMAN2Q12907 356 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 ZNF177Q13360 481 aaPredicted RBP16.95■□□□□ 0.3
DNMT1-221ENST00000589538 CCDC14Q49A88 953 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 C5orf22Q49AR2 442 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 FNDC3BQ53EP0 1204 aaKnown RBP16.95■□□□□ 0.3
DNMT1-221ENST00000589538 E4F1Q66K89 784 aaPredicted RBP16.95■□□□□ 0.3
DNMT1-221ENST00000589538 TMEM215Q68D42 235 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 DCUN1D2Q6PH85 259 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 SERPINA13PQ6UXR4 307 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 PHLDB2Q86SQ0 1253 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 PGBD3Q8N328 593 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 RNF214Q8ND24 703 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 JOSD2Q8TAC2 188 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 WFDC5Q8TCV5 224 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 HMGB4Q8WW32 186 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 CENPIQ92674 756 aaPredicted RBP16.95■□□□□ 0.3
DNMT1-221ENST00000589538 TTC17Q96AE7 1141 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 MYEOVQ96EZ4 313 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 LMLNQ96KR4 655 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 SPACA7Q96KW9 195 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 PARVAQ9NVD7 372 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 NCDNQ9UBB6 729 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 VANGL2Q9ULK5 521 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 ZFHX2Q9C0A1 2572 aaPredicted RBP16.95■□□□□ 0.3
DNMT1-221ENST00000589538 EML5Q05BV3 1969 aa16.95■□□□□ 0.3
DNMT1-221ENST00000589538 TCRBV5S1A1TA0A578 114 aa16.94■□□□□ 0.3
DNMT1-221ENST00000589538 DDX3XO00571 662 aaKnown RBP eCLIP16.94■□□□□ 0.3
DNMT1-221ENST00000589538 FTLP02792 175 aaPredicted RBP16.94■□□□□ 0.3
DNMT1-221ENST00000589538 GYPCP04921 128 aa16.94■□□□□ 0.3
DNMT1-221ENST00000589538 MYBL1P10243 752 aa16.94■□□□□ 0.3
DNMT1-221ENST00000589538 CD70P32970 193 aa16.94■□□□□ 0.3
DNMT1-221ENST00000589538 RFC1P35251 1148 aaPredicted RBP16.94■□□□□ 0.3
DNMT1-221ENST00000589538 CDH4P55283 916 aa16.94■□□□□ 0.3
DNMT1-221ENST00000589538 CDO1Q16878 200 aa16.94■□□□□ 0.3
DNMT1-221ENST00000589538 WDR59Q6PJI9 974 aa16.94■□□□□ 0.3
DNMT1-221ENST00000589538 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.94■□□□□ 0.3
DNMT1-221ENST00000589538 CCAR2Q8N163 923 aaKnown RBP16.94■□□□□ 0.3
DNMT1-221ENST00000589538 GPR161Q8N6U8 529 aaKnown RBP16.94■□□□□ 0.3
DNMT1-221ENST00000589538 KDM1BQ8NB78 822 aa16.94■□□□□ 0.3
DNMT1-221ENST00000589538 OLIG1Q8TAK6 271 aa16.94■□□□□ 0.3
DNMT1-221ENST00000589538 LOXL4Q96JB6 756 aa16.94■□□□□ 0.3
DNMT1-221ENST00000589538 ZC3H10Q96K80 434 aaKnown RBP16.94■□□□□ 0.3
DNMT1-221ENST00000589538 HINFPQ9BQA5 517 aa16.94■□□□□ 0.3
DNMT1-221ENST00000589538 FBRSQ9HAH7 460 aa16.94■□□□□ 0.3
DNMT1-221ENST00000589538 TMCO5BA8MYB1 307 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 ZNF217O75362 1048 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 RHOBTB1O94844 696 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 SKILP12757 684 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 RRM1P23921 792 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 HOXC13P31276 330 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 CSKP41240 450 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 IL12RB1P42701 662 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 ZNF143P52747 638 aaPredicted RBP16.93■□□□□ 0.3
DNMT1-221ENST00000589538 ST8SIA6P61647 398 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 SULT2A1Q06520 285 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 SRSF5Q13243 272 aaKnown RBP16.93■□□□□ 0.3
DNMT1-221ENST00000589538 ELF2Q15723 593 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 TSR1Q2NL82 804 aaKnown RBP16.93■□□□□ 0.3
DNMT1-221ENST00000589538 C15orf59Q2T9L4 293 aaPredicted RBP16.93■□□□□ 0.3
DNMT1-221ENST00000589538 FUT11Q495W5 492 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 PITRM1Q5JRX3 1037 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 PPP1R15BQ5SWA1 713 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 FAM131BQ86XD5 332 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 DRC7Q8IY82 874 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 FAM172AQ8WUF8 416 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 SORCS1Q8WY21 1168 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 IGSF8Q969P0 613 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 MCEEQ96PE7 176 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 CNPY3Q9BT09 278 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 TPSD1Q9BZJ3 242 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 TMEM245Q9H330 911 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 RETREG1Q9H6L5 497 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 TAS2R14Q9NYV8 317 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 SUN2Q9UH99 717 aa16.93■□□□□ 0.3
DNMT1-221ENST00000589538 SCINQ9Y6U3 715 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms