RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 OXTRP30559 389 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 SLC6A4P31645 630 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 CDH5P33151 784 aaPredicted RBP10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 NOS2P35228 1153 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 CLCN1P35523 988 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 SCNN1AP37088 669 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 SGSHP51688 502 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 OXCT1P55809 520 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 SLC6A3Q01959 620 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 KCNMA1Q12791 1236 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 LMAN2Q12907 356 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 ENPP2Q13822 863 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 CCDC6Q16204 474 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 FUT11Q495W5 492 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 PTPN20Q4JDL3 420 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 MS4A13Q5J8X5 152 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 SYCP2LQ5T4T6 812 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 FAM102AQ5T9C2 384 aaPredicted RBP10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 RNF219Q5W0B1 726 aaPredicted RBP10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 MBLAC2Q68D91 279 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 RNF43Q68DV7 783 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 KIAA1211LQ6NV74 962 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 OLFML1Q6UWY5 402 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 ARMCX6Q7L4S7 300 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 SLC26A9Q7LBE3 791 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 TMEFF1Q8IYR6 380 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 LGI2Q8N0V4 545 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 DEFB106AQ8N104 65 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 CARNMT1Q8N4J0 409 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 ZNF397Q8NF99 534 aaPredicted RBP10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 NEK11Q8NG66 645 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 CEP76Q8TAP6 659 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 ZCCHC14Q8WYQ9 949 aaKnown RBP10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 PIGKQ92643 395 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 PRCCQ92733 491 aaPredicted RBP10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 SIPA1Q96FS4 1042 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 PRICKLE1Q96MT3 831 aaPredicted RBP10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 PPP1R9BQ96SB3 815 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 NAA15Q9BXJ9 866 aaKnown RBP10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 NUCKS1Q9H1E3 243 aaKnown RBP10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 COX16Q9P0S2 106 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 SUSD2Q9UGT4 822 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 TMEM131Q92545 1883 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 PCDH15Q96QU1 1955 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 NUMA1Q14980 2115 aa10.97□□□□□ -0.65
CLPTM1-211ENST00000589347 CELSR3Q9NYQ7 3312 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 ASCC3Q8N3C0 2202 aaKnown RBP10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 CHD5Q8TDI0 1954 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 GOLGA6L7A0A1B0GV03 622 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 A0A1B0GVM2 712 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 TCAF2A6NFQ2 919 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 SMTNL1A8MU46 457 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 LGALS16A8MUM7 142 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 MEI4A8MW99 385 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 KCNU1A8MYU2 1149 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 GRAP2O75791 330 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 DLDP09622 509 aaKnown RBP10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 PRKCHP24723 683 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 SULT1E1P49888 294 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 NOVA1P51513 510 aaKnown RBP10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 COPB1P53618 953 aaKnown RBP10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 ZNF252P-AS1Q0IIN9 211 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 SFSWAPQ12872 951 aaKnown RBP10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 NME3Q13232 169 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 TTC31Q49AM3 519 aaPredicted RBP10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 ZC3H12AQ5D1E8 599 aaKnown RBP10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 ACBD5Q5T8D3 534 aaPredicted RBP10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 TAF3Q5VWG9 929 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 DAB2IPQ5VWQ8 1189 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 SYPL2Q5VXT5 272 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 RAP1GAP2Q684P5 730 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 NADSYN1Q6IA69 706 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 TRIM72Q6ZMU5 477 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 METTL3Q86U44 580 aaKnown RBP10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 ERICH1Q86X53 443 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 SYT12Q8IV01 421 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 OR2T3Q8NH03 318 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 FIBINQ8TAL6 211 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 CYB5D2Q8WUJ1 264 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 FOXJ1Q92949 421 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 C18orf8Q96DM3 657 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 ERLEC1Q96DZ1 483 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 P2RY11Q96G91 374 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 MRGPRX1Q96LB2 322 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 GANQ9H2C0 597 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 SMOC1Q9H4F8 434 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 FAM207AQ9NSI2 230 aaPredicted RBP10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 FANCLQ9NW38 375 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 KIAA1522Q9P206 1035 aaPredicted RBP10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 SUN2Q9UH99 717 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 LIMA1Q9UHB6 759 aaKnown RBP10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 EVLQ9UI08 416 aaPredicted RBP10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 MBD1Q9UIS9 605 aaPredicted RBP10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 CLEC4EQ9ULY5 219 aa10.96□□□□□ -0.65
CLPTM1-211ENST00000589347 WASH3PC4AMC7 463 aa10.95□□□□□ -0.66
CLPTM1-211ENST00000589347 GIPC1O14908 333 aa10.95□□□□□ -0.66
CLPTM1-211ENST00000589347 RNASEH1O60930 286 aaKnown RBP10.95□□□□□ -0.66
CLPTM1-211ENST00000589347 SRPRAP08240 638 aaKnown RBP10.95□□□□□ -0.66
CLPTM1-211ENST00000589347 CCDC172P0C7W6 258 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms