RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 RARAP10276 462 aa19.57■□□□□ 0.72
CLPTM1-209ENST00000588855 GJC1P36383 396 aa19.57■□□□□ 0.72
CLPTM1-209ENST00000588855 NAP1L1P55209 391 aaKnown RBP19.57■□□□□ 0.72
CLPTM1-209ENST00000588855 TTC39BQ5VTQ0 682 aaPredicted RBP19.57■□□□□ 0.72
CLPTM1-209ENST00000588855 ASTLQ6HA08 431 aaPredicted RBP19.57■□□□□ 0.72
CLPTM1-209ENST00000588855 LRRC31Q6UY01 552 aa19.57■□□□□ 0.72
CLPTM1-209ENST00000588855 CARNMT1Q8N4J0 409 aa19.57■□□□□ 0.72
CLPTM1-209ENST00000588855 DEC1Q9P2X7 70 aa19.57■□□□□ 0.72
CLPTM1-209ENST00000588855 FBXO10Q9UK96 956 aa19.57■□□□□ 0.72
CLPTM1-209ENST00000588855 NEU3Q9UQ49 428 aa19.57■□□□□ 0.72
CLPTM1-209ENST00000588855 A0A1B0GVM2 712 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 KANSL1LA0AUZ9 987 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 TCAF2A6NFQ2 919 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 LUC7L3O95232 432 aaKnown RBP19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 COMTP21964 271 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 TARSP26639 723 aaKnown RBP19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 L1CAMP32004 1257 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 DGKGP49619 791 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 SEMA3BQ13214 749 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 UBXN2BQ14CS0 331 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 HADHQ16836 314 aaKnown RBP19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 ALFQ53S48 1182 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 TMEM196Q5HYL7 178 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 GRAMD4Q6IC98 578 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 FSTL4Q6MZW2 842 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 C11orf63Q6NUN7 778 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 PSTKQ8IV42 348 aaKnown RBP19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 MFN1Q8IWA4 741 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 SFTPA1Q8IWL2 248 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 CCAR2Q8N163 923 aaKnown RBP19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 HSPH1Q92598 858 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 KCTD15Q96SI1 283 aaPredicted RBP19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 PNKPQ96T60 521 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 MFSD1Q9H3U5 465 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 LTB4R2Q9NPC1 389 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 ARHGEF4Q9NR80 690 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 MPP6Q9NZW5 540 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 PPP2R2CQ9Y2T4 447 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 MTF2Q9Y483 593 aaPredicted RBP19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 DRGXA6NNA5 263 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 CREB3O43889 395 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 MOCS3O95396 460 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 CISD3P0C7P0 127 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 SLC1A1P43005 524 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 BOLA3Q53S33 107 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 CWF19L1Q69YN2 538 aaKnown RBP19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 DAAM2Q86T65 1068 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 ZNF687Q8N1G0 1237 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 FLCNQ8NFG4 579 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 TEKT4Q8WW24 435 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 EZH1Q92800 747 aaPredicted RBP19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 TBC1D31Q96DN5 1066 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 TSGA10Q9BZW7 698 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 KLHL11Q9NVR0 708 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 PPARGC1AQ9UBK2 798 aaKnown RBP19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 ALG6Q9Y672 507 aa19.56■□□□□ 0.72
CLPTM1-209ENST00000588855 ATG2BQ96BY7 2078 aa19.55■□□□□ 0.72
CLPTM1-209ENST00000588855 H0Y626 953 aa19.55■□□□□ 0.72
CLPTM1-209ENST00000588855 STK25O00506 426 aa19.55■□□□□ 0.72
CLPTM1-209ENST00000588855 SPOPO43791 374 aa19.55■□□□□ 0.72
CLPTM1-209ENST00000588855 KAT7O95251 611 aa19.55■□□□□ 0.72
CLPTM1-209ENST00000588855 HLA-FP30511 346 aa19.55■□□□□ 0.72
CLPTM1-209ENST00000588855 CDH18Q13634 790 aa19.55■□□□□ 0.72
CLPTM1-209ENST00000588855 DPYSL2Q16555 572 aa19.55■□□□□ 0.72
CLPTM1-209ENST00000588855 ATP13A4Q4VNC1 1196 aa19.55■□□□□ 0.72
CLPTM1-209ENST00000588855 PPP6R3Q5H9R7 873 aaPredicted RBP19.55■□□□□ 0.72
CLPTM1-209ENST00000588855 FSCBQ5H9T9 825 aa19.55■□□□□ 0.72
CLPTM1-209ENST00000588855 RWDD4Q6NW29 188 aaKnown RBP19.55■□□□□ 0.72
CLPTM1-209ENST00000588855 CHST9Q7L1S5 443 aa19.55■□□□□ 0.72
CLPTM1-209ENST00000588855 TFAP2DQ7Z6R9 452 aa19.55■□□□□ 0.72
CLPTM1-209ENST00000588855 TERB1Q8NA31 727 aa19.55■□□□□ 0.72
CLPTM1-209ENST00000588855 CALR3Q96L12 384 aaKnown RBP19.55■□□□□ 0.72
CLPTM1-209ENST00000588855 EPAS1Q99814 870 aa19.55■□□□□ 0.72
CLPTM1-209ENST00000588855 SLC2A11Q9BYW1 496 aa19.55■□□□□ 0.72
CLPTM1-209ENST00000588855 ZYG11BQ9C0D3 744 aa19.55■□□□□ 0.72
CLPTM1-209ENST00000588855 MRPS17Q9Y2R5 130 aaKnown RBP19.55■□□□□ 0.72
CLPTM1-209ENST00000588855 GRID2IPA4D2P6 1211 aa19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 KRT86O43790 486 aa19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 CLDN11O75508 207 aa19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 EGFP01133 1207 aa19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 APODP05090 189 aa19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 HOXC13P31276 330 aa19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 CDH4P55283 916 aa19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 GRSF1Q12849 480 aaKnown RBP eCLIP19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 GEN1Q17RS7 908 aa19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 CXorf57Q6NSI4 855 aaKnown RBP19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 SUGP1Q8IWZ8 645 aaKnown RBP19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 LRRC57Q8N9N7 239 aa19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 PJA1Q8NG27 643 aa19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 FIBINQ8TAL6 211 aa19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 EXOC4Q96A65 974 aa19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 LZTFL1Q9NQ48 299 aa19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 ABCB8Q9NUT2 735 aa19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 ZNF212Q9UDV6 495 aa19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 GUCA1BQ9UMX6 200 aa19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 SLC27A6Q9Y2P4 619 aa19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 CAPN6Q9Y6Q1 641 aa19.54■□□□□ 0.72
CLPTM1-209ENST00000588855 FAM86C2PA6NEL3 165 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms