RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 KLK10O43240 276 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 RNASEH1O60930 286 aaKnown RBP8.91□□□□□ -0.98
SDF2-204ENST00000587338 SDC3O75056 442 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 RNASEH2AO75792 299 aaKnown RBP8.91□□□□□ -0.98
SDF2-204ENST00000587338 MT-CO3P00414 261 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 ATP5BP06576 529 aaKnown RBP8.91□□□□□ -0.98
SDF2-204ENST00000587338 C7P10643 843 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 ASPAP45381 313 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 AP3M2P53677 418 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 GABREP78334 506 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 KCNJ12Q14500 433 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 SGSM1Q2NKQ1 1148 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 SLC45A4Q5BKX6 768 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 SFMBT2Q5VUG0 894 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 MBLAC2Q68D91 279 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 SPOPLQ6IQ16 392 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 FAM217AQ8IXS0 508 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 GRAMD1CQ8IYS0 662 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 CACTIN-AS1Q8N1I8 211 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 ZNF276Q8N554 614 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 OXR1Q8N573 874 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 OR2T34Q8NGX1 318 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 TTC9Q92623 222 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 PLD4Q96BZ4 506 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 HIC2Q96JB3 615 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 ZNF578Q96N58 590 aaPredicted RBP8.91□□□□□ -0.98
SDF2-204ENST00000587338 OMDQ99983 421 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.91□□□□□ -0.98
SDF2-204ENST00000587338 TRIM4Q9C037 500 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 RSPH9Q9H1X1 276 aaPredicted RBP8.91□□□□□ -0.98
SDF2-204ENST00000587338 NEUROG2Q9H2A3 272 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 SUN2Q9UH99 717 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 USP25Q9UHP3 1055 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 SCML1Q9UN30 329 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 SPTAN1Q13813 2472 aaKnown RBP8.91□□□□□ -0.98
SDF2-204ENST00000587338 UBE4BO95155 1302 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 BIN1O00499 593 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 SIGLEC6O43699 453 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 ACTN4O43707 911 aaKnown RBP8.9□□□□□ -0.98
SDF2-204ENST00000587338 SIN3BO75182 1162 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 C4BPAP04003 597 aaKnown RBP8.9□□□□□ -0.98
SDF2-204ENST00000587338 SLFN14P0C7P3 912 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 CD58P19256 250 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 POLR2EP19388 210 aaKnown RBP8.9□□□□□ -0.98
SDF2-204ENST00000587338 ACP1P24666 158 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 CD70P32970 193 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 PIK3CAP42336 1068 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 RXRGP48443 463 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 HARS2P49590 506 aaKnown RBP8.9□□□□□ -0.98
SDF2-204ENST00000587338 ZNF445P59923 1031 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 ST8SIA6P61647 398 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 YWHAGP61981 247 aaKnown RBP eCLIP8.9□□□□□ -0.98
SDF2-204ENST00000587338 SNRPFP62306 86 aaKnown RBP8.9□□□□□ -0.98
SDF2-204ENST00000587338 DAB2P98082 770 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 EHHADHQ08426 723 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 PDE4CQ08493 712 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 VAC14Q08AM6 782 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 SFSWAPQ12872 951 aaKnown RBP8.9□□□□□ -0.98
SDF2-204ENST00000587338 PNOCQ13519 176 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 GSE1Q14687 1217 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 CST6Q15828 149 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 PROX2Q3B8N5 592 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 KIAA1614Q5VZ46 1190 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 ISM2Q6H9L7 571 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 MMAAQ8IVH4 418 aaKnown RBP8.9□□□□□ -0.98
SDF2-204ENST00000587338 ARHGAP18Q8N392 663 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.9□□□□□ -0.98
SDF2-204ENST00000587338 PARD3BQ8TEW8 1205 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 SMARCE1Q969G3 411 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 TMA16Q96EY4 203 aaKnown RBP8.9□□□□□ -0.98
SDF2-204ENST00000587338 MED8Q96G25 268 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 PAGE5Q96GU1 130 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 NT5C1AQ9BXI3 368 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 DUSP16Q9BY84 665 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 LRRC27Q9C0I9 530 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 TSPY26PQ9H489 355 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 HEMK1Q9Y5R4 338 aaPredicted RBP8.9□□□□□ -0.98
SDF2-204ENST00000587338 USP3Q9Y6I4 520 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 DOPEY2Q9Y3R5 2298 aa8.9□□□□□ -0.98
SDF2-204ENST00000587338 MYO9AB2RTY4 2548 aa8.9□□□□□ -0.99
SDF2-204ENST00000587338 NOTCH2Q04721 2471 aa8.9□□□□□ -0.99
SDF2-204ENST00000587338 TRIM38O00635 465 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 USP12O75317 370 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 SMC2O95347 1197 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 ASS1P00966 412 aaKnown RBP8.89□□□□□ -0.99
SDF2-204ENST00000587338 RPN1P04843 607 aaKnown RBP8.89□□□□□ -0.99
SDF2-204ENST00000587338 PRR29P0C7W0 189 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 PSMD8P48556 350 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 CSRP3P50461 194 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 CCR5P51681 352 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 SGSHP51688 502 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 ADPRHP54922 357 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 PPP2CBP62714 309 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 PPP2CAP67775 309 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 DLG4P78352 724 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 E2F1Q01094 437 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 INCA1Q0VD86 236 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 TRIP4Q15650 581 aaPredicted RBP8.89□□□□□ -0.99
SDF2-204ENST00000587338 ZACNQ401N2 412 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 HS1BP3Q53T59 392 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms