RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 NR2C2P49116 596 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 CXCR3P49682 368 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 ZXDAP98168 799 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 CUL1Q13616 776 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 ARTNQ5T4W7 220 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 CPNE8Q86YQ8 564 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 MIB1Q86YT6 1006 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 MFSD6LQ8IWD5 586 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 IFT20Q8IY31 132 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 FBXL6Q8N531 539 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 CELF5Q8N6W0 485 aaKnown RBP13.06□□□□□ -0.32
VMP1-202ENST00000585847 PRSS33Q8NF86 280 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.06□□□□□ -0.32
VMP1-202ENST00000585847 TSC1Q92574 1164 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 HAUS1Q96CS2 278 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 P2RY11Q96G91 374 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 MAK16Q9BXY0 300 aaKnown RBP13.06□□□□□ -0.32
VMP1-202ENST00000585847 KIF9Q9HAQ2 790 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 KCNK12Q9HB15 430 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 RBM12Q9NTZ6 932 aaKnown RBP13.06□□□□□ -0.32
VMP1-202ENST00000585847 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.06□□□□□ -0.32
VMP1-202ENST00000585847 CFAP97Q9P2B7 532 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 RAB21Q9UL25 225 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 CFAP69A5D8W1 941 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 H3BRJ5 948 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 M0QYT0 321 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 ARNTLO00327 626 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 SCAMP3O14828 347 aaKnown RBP13.05□□□□□ -0.32
VMP1-202ENST00000585847 HMBSP08397 361 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 IRF1P10914 325 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 CCR1P32246 355 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 DRG2P55039 364 aaKnown RBP13.05□□□□□ -0.32
VMP1-202ENST00000585847 ATP11AP98196 1134 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 NRG1Q02297 640 aaPredicted RBP13.05□□□□□ -0.32
VMP1-202ENST00000585847 RING1Q06587 406 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 FCHO2Q0JRZ9 810 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 GRM2Q14416 872 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 CEP128Q6ZU80 1094 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 HTR3DQ70Z44 454 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 MTSS1LQ765P7 747 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 SLC44A3Q8N4M1 653 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 BPIFB1Q8TDL5 484 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 HNRNPLLQ8WVV9 542 aaKnown RBP13.05□□□□□ -0.32
VMP1-202ENST00000585847 NKD2Q969F2 451 aaPredicted RBP13.05□□□□□ -0.32
VMP1-202ENST00000585847 MS4A14Q96JA4 679 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 HAPLN3Q96S86 360 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 PHOX2BQ99453 314 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 EPAS1Q99814 870 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 FERMT1Q9BQL6 677 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 BRD8Q9H0E9 1235 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 TSPYL1Q9H0U9 437 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 LINC00597Q9H2U6 94 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 PIGVQ9NUD9 493 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 DDIT4Q9NX09 232 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 SLC12A6Q9UHW9 1150 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 XPO7Q9UIA9 1087 aaKnown RBP13.05□□□□□ -0.32
VMP1-202ENST00000585847 AP4E1Q9UPM8 1137 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 TLR6Q9Y2C9 796 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 UTP11Q9Y3A2 253 aaKnown RBP13.05□□□□□ -0.32
VMP1-202ENST00000585847 HBS1LQ9Y450 684 aaKnown RBP13.05□□□□□ -0.32
VMP1-202ENST00000585847 TICRRQ7Z2Z1 1910 aa13.05□□□□□ -0.32
VMP1-202ENST00000585847 TECTAO75443 2155 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 C3orf70A6NLC5 250 aaPredicted RBP13.04□□□□□ -0.32
VMP1-202ENST00000585847 KCNU1A8MYU2 1149 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 SMAPO00193 183 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 GFRA2O00451 464 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 NCAM2O15394 837 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 NARSO43776 548 aaKnown RBP13.04□□□□□ -0.32
VMP1-202ENST00000585847 ECEL1O95672 775 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 IL1R2P27930 398 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 ADRA1BP35368 520 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 ARSEP51690 589 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 CDH6P55285 790 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 TBX4P57082 545 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 COG7P83436 770 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 DR1Q01658 176 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 SIGLEC14Q08ET2 396 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 ZNF211Q13398 564 aaPredicted RBP13.04□□□□□ -0.32
VMP1-202ENST00000585847 CDO1Q16878 200 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 ERCC6LQ2NKX8 1250 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 IER5LQ5T953 404 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 NUGGCQ68CJ6 796 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 SCYL2Q6P3W7 929 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 C4orf22Q6V702 233 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 BBS7Q8IWZ6 715 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 PRELID2Q8N945 189 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 NOA1Q8NC60 698 aaKnown RBP13.04□□□□□ -0.32
VMP1-202ENST00000585847 BBOF1Q8ND07 529 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 ATL2Q8NHH9 583 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 NXPE3Q969Y0 559 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 MAGOHBQ96A72 148 aaKnown RBP13.04□□□□□ -0.32
VMP1-202ENST00000585847 PLD4Q96BZ4 506 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 ZFYVE19Q96K21 471 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 FAM83CQ9BQN1 747 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 SNRNP25Q9BV90 132 aaKnown RBP13.04□□□□□ -0.32
VMP1-202ENST00000585847 OSBPL2Q9H1P3 480 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 HPS4Q9NQG7 708 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 TMPRSS4Q9NRS4 437 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 FAM114A2Q9NRY5 505 aa13.04□□□□□ -0.32
VMP1-202ENST00000585847 IGSF9Q9P2J2 1179 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms