RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 CLTBP09497 229 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 CTSHP09668 335 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 HALP42357 657 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 TMEM62Q0P6H9 643 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 INO80DQ53TQ3 878 aaPredicted RBP13.31□□□□□ -0.28
RNF43-208ENST00000584437 PTAR1Q7Z6K3 402 aaPredicted RBP13.31□□□□□ -0.28
RNF43-208ENST00000584437 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.31□□□□□ -0.28
RNF43-208ENST00000584437 C10orf53Q8N6V4 93 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 VAT1Q99536 393 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 GORASP1Q9BQQ3 440 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 SEMA6AQ9H2E6 1030 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 PADI4Q9UM07 663 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 ABCA6Q8N139 1617 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 FAM237AA0A1B0GTK4 181 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 PDE2AO00408 941 aaPredicted RBP13.31□□□□□ -0.28
RNF43-208ENST00000584437 PARNO95453 639 aaKnown RBP13.31□□□□□ -0.28
RNF43-208ENST00000584437 DPYSL3Q14195 570 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 NR1D2Q14995 579 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 TAF5Q15542 800 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 ILDR2Q71H61 639 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 ABT1Q9ULW3 272 aaKnown RBP13.31□□□□□ -0.28
RNF43-208ENST00000584437 CHKBQ9Y259 395 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 UBXN8O00124 270 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 CHADO15335 359 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 ARP10275 920 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 JAK1P23458 1154 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 ZCCHC23Q6ZST2 131 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 SH3RF1Q7Z6J0 888 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 ADGRF2Q8IZF7 708 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 ZNF276Q8N554 614 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 PNPLA3Q9NST1 481 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 RBM22Q9NW64 420 aaKnown RBP eCLIP13.31□□□□□ -0.286e-7■■■□□ 16.6
RNF43-208ENST00000584437 TAS2R13Q9NYV9 303 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 PIGNO95427 931 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 STAG3L1P0CL83 205 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 ARL4DP49703 201 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 PKNOX1P55347 436 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 KAT2BQ92831 832 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 PTCD3Q96EY7 689 aaKnown RBP13.31□□□□□ -0.28
RNF43-208ENST00000584437 DGCR6LQ9BY27 220 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 CHST7Q9NS84 486 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 MRPL39Q9NYK5 338 aaKnown RBP13.31□□□□□ -0.28
RNF43-208ENST00000584437 KRT36O76013 467 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 FEN1P39748 380 aaKnown RBP13.31□□□□□ -0.28
RNF43-208ENST00000584437 TNK2Q07912 1038 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 PDIA6Q15084 440 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 NRF1Q16656 503 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 DNAAF5Q86Y56 855 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 LZTR1Q8N653 840 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 POP5Q969H6 163 aaKnown RBP13.31□□□□□ -0.28
RNF43-208ENST00000584437 GMCL1Q96IK5 515 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 NT5MQ9NPB1 228 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 PRDM5Q9NQX1 630 aaPredicted RBP13.31□□□□□ -0.28
RNF43-208ENST00000584437 ABI2Q9NYB9 513 aaPredicted RBP13.31□□□□□ -0.28
RNF43-208ENST00000584437 AHSPQ9NZD4 102 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 ITGA11Q9UKX5 1188 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 CCT3P49368 545 aaKnown RBP13.3□□□□□ -0.28
RNF43-208ENST00000584437 ZNF135P52742 658 aaPredicted RBP13.3□□□□□ -0.28
RNF43-208ENST00000584437 GRIK3Q13003 919 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 POU6F1Q14863 301 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 ZCCHC8Q6NZY4 707 aaKnown RBP13.3□□□□□ -0.28
RNF43-208ENST00000584437 KIAA0408Q6ZU52 694 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 OOSP2Q86WS3 158 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 OSBPL11Q9BXB4 747 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 TUBA8Q9NY65 449 aaPredicted RBP13.3□□□□□ -0.28
RNF43-208ENST00000584437 ATXN10Q9UBB4 475 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 RPS6KB2Q9UBS0 482 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 ADAM28Q9UKQ2 775 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 BARX2Q9UMQ3 279 aaPredicted RBP13.3□□□□□ -0.28
RNF43-208ENST00000584437 ADCY6O43306 1168 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 TNFRSF21O75509 655 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 TSPAN19P0C672 248 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 CDC25CP30307 473 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 FLT3P36888 993 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 OR1G1P47890 313 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 LHX1P48742 406 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 EIF2B5Q13144 721 aaKnown RBP13.3□□□□□ -0.28
RNF43-208ENST00000584437 PRR5LQ6MZQ0 368 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 MAGEC3Q8TD91 643 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 PNMA5Q96PV4 448 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 YIPF2Q9BWQ6 316 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 EPB41L4BQ9H329 900 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 MIEF1Q9NQG6 463 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 CLIC5Q9NZA1 410 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 GSTK1Q9Y2Q3 226 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 ASTN2O75129 1339 aaPredicted RBP13.3□□□□□ -0.28
RNF43-208ENST00000584437 TRIM38O00635 465 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 ENTPD5O75356 428 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 PAEPP09466 180 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 COX4I1P13073 169 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 PAICSP22234 425 aaKnown RBP13.3□□□□□ -0.28
RNF43-208ENST00000584437 RXRBP28702 533 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 PIK3CGP48736 1102 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 MARC1Q5VT66 337 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 METTL6Q8TCB7 284 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 ACMSDQ8TDX5 336 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 CAPSLQ8WWF8 208 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 SPIRE2Q8WWL2 714 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 TEKT5Q96M29 485 aa13.3□□□□□ -0.28
RNF43-208ENST00000584437 POMKQ9H5K3 350 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms