RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 GGCXP38435 758 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 TERF1P54274 439 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 DPYSL3Q14195 570 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 GRM2Q14416 872 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 DHCR24Q15392 516 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 PPP2R5EQ16537 467 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 TAZQ16635 292 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 ARTNQ5T4W7 220 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 FAM72AQ5TYM5 149 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 RNF43Q68DV7 783 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 FAM72DQ6L9T8 149 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 CHST9Q7L1S5 443 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 C14orf80Q86SX3 495 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 FAM72BQ86X60 149 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 SLC44A3Q8N4M1 653 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 ZNF557Q8N988 423 aaPredicted RBP12.02□□□□□ -0.49
CDRT1-207ENST00000583965 DDI1Q8WTU0 396 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 FAF2Q96CS3 445 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 ASIC4Q96FT7 647 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 PRICKLE1Q96MT3 831 aaPredicted RBP12.02□□□□□ -0.49
CDRT1-207ENST00000583965 WDR24Q96S15 920 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 RPP25Q9BUL9 199 aaKnown RBP12.02□□□□□ -0.49
CDRT1-207ENST00000583965 CALN1Q9BXU9 219 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 MAGEB5Q9BZ81 275 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 ZYG11BQ9C0D3 744 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 BRD9Q9H8M2 597 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 KLHL11Q9NVR0 708 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 CWC15Q9P013 229 aaKnown RBP12.02□□□□□ -0.49
CDRT1-207ENST00000583965 NEU3Q9UQ49 428 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 EFR3BQ9Y2G0 817 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 SNX10Q9Y5X0 201 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 F5P12259 2224 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 WASH4PA8MWX3 477 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 PI4K2BG5E9Z4 385 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 ARNTLO00327 626 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 CES2O00748 559 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 ENC1O14682 589 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 TRDMT1O14717 391 aaKnown RBP12.01□□□□□ -0.49
CDRT1-207ENST00000583965 FANCGO15287 622 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 HOXC11O43248 304 aaPredicted RBP12.01□□□□□ -0.49
CDRT1-207ENST00000583965 DAPK3O43293 454 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 TSPAN3O60637 253 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 TBL1XO60907 577 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 CLDN11O75508 207 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 PENKP01210 267 aaPredicted RBP12.01□□□□□ -0.49
CDRT1-207ENST00000583965 ATP1A1P05023 1023 aaKnown RBP12.01□□□□□ -0.49
CDRT1-207ENST00000583965 CYP17A1P05093 508 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 CD48P09326 243 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 ADH5P11766 374 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 ARSAP15289 507 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 PRLRP16471 622 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 ZFXP17010 805 aaPredicted RBP12.01□□□□□ -0.49
CDRT1-207ENST00000583965 RHOQP17081 205 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 GOT1P17174 413 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 IL4RP24394 825 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 PTPN7P35236 360 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 CDKN2BP42772 138 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 VCPP55072 806 aaKnown RBP12.01□□□□□ -0.49
CDRT1-207ENST00000583965 CDH4P55283 916 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 GAD2Q05329 585 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 TDGQ13569 410 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 RUNX3Q13761 415 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 TUBB2AQ13885 445 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 DPYSQ14117 519 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 ITPRIPL2Q3MIP1 535 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 ANKRD20A8PQ5CZ79 823 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 TFDP3Q5H9I0 405 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 LY6G5CQ5SRR4 150 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 SEL1L2Q5TEA6 688 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 FYB2Q5VWT5 728 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 TRIM68Q6AZZ1 485 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 RWDD4Q6NW29 188 aaKnown RBP12.01□□□□□ -0.49
CDRT1-207ENST00000583965 RHBDF2Q6PJF5 856 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 MFSD7Q6UXD7 560 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 SPOCD1Q6ZMY3 1216 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 TPGS1Q6ZTW0 290 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 RFX8Q6ZV50 586 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 TMEM25Q86YD3 366 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 CCDC50Q8IVM0 306 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 CCDC117Q8IWD4 279 aaPredicted RBP12.01□□□□□ -0.49
CDRT1-207ENST00000583965 CSGALNACT1Q8TDX6 532 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 RSAD2Q8WXG1 361 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 DNASE1L2Q92874 299 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 IGSF8Q969P0 613 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 RNF25Q96BH1 459 aaPredicted RBP12.01□□□□□ -0.49
CDRT1-207ENST00000583965 ZFYVE19Q96K21 471 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 PBKQ96KB5 322 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 CSPG4P5Q96PW8 444 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 TUBB2BQ9BVA1 445 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 BBS2Q9BXC9 721 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 MAK16Q9BXY0 300 aaKnown RBP12.01□□□□□ -0.49
CDRT1-207ENST00000583965 SLC2A11Q9BYW1 496 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 EBF3Q9H4W6 596 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 ECT2Q9H8V3 914 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 L2HGDHQ9H9P8 463 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 HPS4Q9NQG7 708 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 TMEM248Q9NWD8 314 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 DNAI1Q9UI46 699 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 SNX12Q9UMY4 172 aa12.01□□□□□ -0.49
CDRT1-207ENST00000583965 ATG2BQ96BY7 2078 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms