RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 GOLGA6L6A8MZA4 724 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 TULP2O00295 520 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 TSPAN3O60637 253 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 ARID5AQ03989 594 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 TRIP4Q15650 581 aaPredicted RBP21.32■■□□□ 1
SRSF1-206ENST00000583741 LAYNQ6UX15 382 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 PCMTD1Q96MG8 357 aaPredicted RBP21.32■■□□□ 1
SRSF1-206ENST00000583741 ULBP1Q9BZM6 244 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 UBXN6Q9BZV1 441 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 LHX5Q9H2C1 402 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 TMEM8AQ9HCN3 771 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 SNX11Q9Y5W9 270 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 GOLGA8CPA6NN73 597 aa21.31■■□□□ 1
SRSF1-206ENST00000583741 TIMM44O43615 452 aa21.31■■□□□ 1
SRSF1-206ENST00000583741 PLXNA2O75051 1894 aa21.31■■□□□ 1
SRSF1-206ENST00000583741 C7P10643 843 aa21.31■■□□□ 1
SRSF1-206ENST00000583741 TKTL1P51854 596 aa21.31■■□□□ 1
SRSF1-206ENST00000583741 E2F5Q15329 346 aa21.31■■□□□ 1
SRSF1-206ENST00000583741 FNDC3BQ53EP0 1204 aaKnown RBP21.31■■□□□ 1
SRSF1-206ENST00000583741 PM20D1Q6GTS8 502 aa21.31■■□□□ 1
SRSF1-206ENST00000583741 FMNL3Q8IVF7 1028 aa21.31■■□□□ 1
SRSF1-206ENST00000583741 CCDC150Q8NCX0 1101 aa21.31■■□□□ 1
SRSF1-206ENST00000583741 HNRNPLLQ8WVV9 542 aaKnown RBP21.31■■□□□ 1
SRSF1-206ENST00000583741 TMEM176AQ96HP8 235 aa21.31■■□□□ 1
SRSF1-206ENST00000583741 CDC6Q99741 560 aa21.31■■□□□ 1
SRSF1-206ENST00000583741 DNAI2Q9GZS0 605 aa21.31■■□□□ 1
SRSF1-206ENST00000583741 IMPACTQ9P2X3 320 aa21.31■■□□□ 1
SRSF1-206ENST00000583741 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.31■■□□□ 15e-6■■□□□ 11.8
SRSF1-206ENST00000583741 GTPBP10A4D1E9 387 aaKnown RBP21.3■■□□□ 1
SRSF1-206ENST00000583741 ZBED1O96006 694 aa21.3■■□□□ 1
SRSF1-206ENST00000583741 GTF2H1P32780 548 aa21.3■■□□□ 1
SRSF1-206ENST00000583741 PTPRNQ16849 979 aa21.3■■□□□ 1
SRSF1-206ENST00000583741 CBWD6Q4V339 395 aa21.3■■□□□ 1
SRSF1-206ENST00000583741 MPPE1Q53F39 396 aa21.3■■□□□ 1
SRSF1-206ENST00000583741 CBWD3Q5JTY5 395 aa21.3■■□□□ 1
SRSF1-206ENST00000583741 CBWD5Q5RIA9 395 aa21.3■■□□□ 1
SRSF1-206ENST00000583741 ARHGAP17Q68EM7 881 aa21.3■■□□□ 1
SRSF1-206ENST00000583741 KRT39Q6A163 491 aa21.3■■□□□ 1
SRSF1-206ENST00000583741 ADIPOR2Q86V24 386 aa21.3■■□□□ 1
SRSF1-206ENST00000583741 ANKRD52Q8NB46 1076 aa21.3■■□□□ 1
SRSF1-206ENST00000583741 TM9SF3Q9HD45 589 aa21.3■■□□□ 1
SRSF1-206ENST00000583741 ANKRD6Q9Y2G4 727 aa21.3■■□□□ 1
SRSF1-206ENST00000583741 SIK3Q9Y2K2 1263 aa21.3■■□□□ 1
SRSF1-206ENST00000583741 KCNK3O14649 394 aa21.29■■□□□ 1
SRSF1-206ENST00000583741 P4HA2O15460 535 aa21.29■■□□□ 1
SRSF1-206ENST00000583741 PTMAP06454 111 aaKnown RBP21.29■■□□□ 1
SRSF1-206ENST00000583741 MXI1P50539 228 aa21.29■■□□□ 1
SRSF1-206ENST00000583741 CETN1Q12798 172 aa21.29■■□□□ 1
SRSF1-206ENST00000583741 GBP6Q6ZN66 633 aa21.29■■□□□ 1
SRSF1-206ENST00000583741 CHST9Q7L1S5 443 aa21.29■■□□□ 1
SRSF1-206ENST00000583741 BIRC7Q96CA5 298 aa21.29■■□□□ 1
SRSF1-206ENST00000583741 CRACR2AQ9BSW2 395 aa21.29■■□□□ 1
SRSF1-206ENST00000583741 ABCB8Q9NUT2 735 aa21.29■■□□□ 1
SRSF1-206ENST00000583741 SFMBT1Q9UHJ3 866 aa21.29■■□□□ 1
SRSF1-206ENST00000583741 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.29■■□□□ 14e-17■■■□□ 14.8
SRSF1-206ENST00000583741 SEMA4FO95754 770 aa21.28■■□□□ 1
SRSF1-206ENST00000583741 GRIA4P48058 902 aa21.28■■□□□ 1
SRSF1-206ENST00000583741 HARS2P49590 506 aaKnown RBP21.28■■□□□ 1
SRSF1-206ENST00000583741 KLK7P49862 253 aa21.28■■□□□ 1
SRSF1-206ENST00000583741 SGSHP51688 502 aa21.28■■□□□ 1
SRSF1-206ENST00000583741 KCNMA1Q12791 1236 aa21.28■■□□□ 1
SRSF1-206ENST00000583741 EXOC3L4Q17RC7 722 aa21.28■■□□□ 1
SRSF1-206ENST00000583741 GOLGA7BQ2TAP0 167 aa21.28■■□□□ 1
SRSF1-206ENST00000583741 KCNT1Q5JUK3 1230 aa21.28■■□□□ 1
SRSF1-206ENST00000583741 EDEM1Q92611 657 aa21.28■■□□□ 1
SRSF1-206ENST00000583741 TATDN2Q93075 761 aa21.28■■□□□ 1
SRSF1-206ENST00000583741 BBC3Q96PG8 261 aaPredicted RBP21.28■■□□□ 1
SRSF1-206ENST00000583741 DKK4Q9UBT3 224 aa21.28■■□□□ 1
SRSF1-206ENST00000583741 STOML2Q9UJZ1 356 aa21.28■■□□□ 1
SRSF1-206ENST00000583741 FAM149AA5PLN7 773 aa21.27■■□□□ 1
SRSF1-206ENST00000583741 PMM2O15305 246 aa21.27■■□□□ 1
SRSF1-206ENST00000583741 MSI1O43347 362 aaKnown RBP21.27■■□□□ 1
SRSF1-206ENST00000583741 RPS14P62263 151 aaKnown RBP21.27■■□□□ 1
SRSF1-206ENST00000583741 PDE4CQ08493 712 aa21.27■■□□□ 1
SRSF1-206ENST00000583741 TBX2Q13207 712 aaPredicted RBP21.27■■□□□ 1
SRSF1-206ENST00000583741 CAMK2BQ13554 666 aa21.27■■□□□ 1
SRSF1-206ENST00000583741 TRIM14Q14142 442 aa21.27■■□□□ 1
SRSF1-206ENST00000583741 KIAA0907Q7Z7F0 614 aaPredicted RBP21.27■■□□□ 1
SRSF1-206ENST00000583741 TTC39CQ8N584 583 aa21.27■■□□□ 1
SRSF1-206ENST00000583741 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.27■■□□□ 12e-7■■□□□ 13.8
SRSF1-206ENST00000583741 FBXL13Q8NEE6 735 aa21.27■■□□□ 1
SRSF1-206ENST00000583741 WFDC5Q8TCV5 224 aa21.27■■□□□ 1
SRSF1-206ENST00000583741 WFIKKN2Q8TEU8 576 aa21.27■■□□□ 1
SRSF1-206ENST00000583741 FAXDC2Q96IV6 333 aa21.27■■□□□ 1
SRSF1-206ENST00000583741 ORAI3Q9BRQ5 295 aa21.27■■□□□ 1
SRSF1-206ENST00000583741 BTBD1Q9H0C5 482 aa21.27■■□□□ 1
SRSF1-206ENST00000583741 OSGEPQ9NPF4 335 aa21.27■■□□□ 1
SRSF1-206ENST00000583741 PRSS16Q9NQE7 514 aa21.27■■□□□ 1
SRSF1-206ENST00000583741 RAB20Q9NX57 234 aa21.27■■□□□ 1
SRSF1-206ENST00000583741 GGA2Q9UJY4 613 aa21.27■■□□□ 1
SRSF1-206ENST00000583741 PLA2G4CQ9UP65 541 aa21.27■■□□□ 1
SRSF1-206ENST00000583741 HBS1LQ9Y450 684 aaKnown RBP21.27■■□□□ 1
SRSF1-206ENST00000583741 H0Y8X5 98 aa21.26■□□□□ 0.99
SRSF1-206ENST00000583741 FSBPO95073 299 aa21.26■□□□□ 0.99
SRSF1-206ENST00000583741 TPM1P09493 284 aa21.26■□□□□ 0.99
SRSF1-206ENST00000583741 SLC8A3P57103 927 aa21.26■□□□□ 0.99
SRSF1-206ENST00000583741 CYP4F3Q08477 520 aa21.26■□□□□ 0.99
SRSF1-206ENST00000583741 ADIGQ0VDE8 80 aa21.26■□□□□ 0.99
SRSF1-206ENST00000583741 SUZ12Q15022 739 aaKnown RBP21.26■□□□□ 0.99
SRSF1-206ENST00000583741 TEAD4Q15561 434 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms