RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 ARHGAP18Q8N392 663 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 SLC35B2Q8TB61 432 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 AENQ8WTP8 325 aaKnown RBP12.37□□□□□ -0.43
GGA3-217ENST00000583667 RNF157Q96PX1 679 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 HERC2P3Q9BVR0 1158 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 HEMGNQ9BXL5 484 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 ZWILCHQ9H900 591 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 EPB41L5Q9HCM4 733 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 FAM114A2Q9NRY5 505 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 ABCC13Q9NSE7 274 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 RASAL2Q9UJF2 1139 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 UTP11Q9Y3A2 253 aaKnown RBP12.37□□□□□ -0.43
GGA3-217ENST00000583667 NEU2Q9Y3R4 380 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 MTMR11A4FU01 709 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 TTI1O43156 1089 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 LIASO43766 372 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 ABLIM3O94929 683 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 RTN3O95197 1032 aaPredicted RBP12.36□□□□□ -0.43
GGA3-217ENST00000583667 PAPLNO95428 1278 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 ITGAVP06756 1048 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 KRT10P13645 584 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 L1CAMP32004 1257 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 HCAR3P49019 387 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 TUFMP49411 452 aaKnown RBP12.36□□□□□ -0.43
GGA3-217ENST00000583667 CXCR3P49682 368 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 PSEN1P49768 467 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 SLC5A3P53794 718 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 RPL10AP62906 217 aaKnown RBP12.36□□□□□ -0.43
GGA3-217ENST00000583667 ADCY2Q08462 1091 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 SRSF5Q13243 272 aaKnown RBP12.36□□□□□ -0.43
GGA3-217ENST00000583667 DPYSL3Q14195 570 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 KCNT1Q5JUK3 1230 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 SLC9A4Q6AI14 798 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 CEP57Q86XR8 500 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 JAMLQ86YT9 394 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 CASKIN2Q8WXE0 1202 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 NDRG1Q92597 394 aaKnown RBP12.36□□□□□ -0.43
GGA3-217ENST00000583667 CAVIN3Q969G5 261 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 FAM149B1Q96BN6 582 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 SNRNP25Q9BV90 132 aaKnown RBP12.36□□□□□ -0.43
GGA3-217ENST00000583667 PCDH18Q9HCL0 1135 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.36□□□□□ -0.43
GGA3-217ENST00000583667 ZNF446Q9NWS9 450 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 CLIC5Q9NZA1 410 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 AFF4Q9UHB7 1163 aaKnown RBP12.36□□□□□ -0.43
GGA3-217ENST00000583667 FBXW11Q9UKB1 542 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 FZD10Q9ULW2 581 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 NAALADL1Q9UQQ1 740 aa12.36□□□□□ -0.43
GGA3-217ENST00000583667 VWA8A3KMH1 1905 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 SHISA7A6NL88 538 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 APOC4-APOC2K7ER74 178 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 M0QYT0 321 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 MAP2K7O14733 419 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 CAPN9O14815 690 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 GIPC1O14908 333 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 CST8O60676 142 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 VNN2O95498 520 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 ECEL1O95672 775 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 GAS8O95995 478 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 APOC2P02655 101 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 OR4Q2P0C623 313 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 ZFXP17010 805 aaPredicted RBP12.35□□□□□ -0.43
GGA3-217ENST00000583667 TFE3P19532 575 aaPredicted RBP12.35□□□□□ -0.43
GGA3-217ENST00000583667 ADRA1BP35368 520 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 CARSP49589 748 aaKnown RBP12.35□□□□□ -0.43
GGA3-217ENST00000583667 SULT1E1P49888 294 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 CDH6P55285 790 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 PFKPQ01813 784 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 DEUP1Q05D60 604 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 RAB33AQ14088 237 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 OASLQ15646 514 aaKnown RBP12.35□□□□□ -0.43
GGA3-217ENST00000583667 CCDC6Q16204 474 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 PSMD5Q16401 504 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 CDO1Q16878 200 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 RAB6CQ53S08 254 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 ZFYVE27Q5T4F4 411 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 MSANTD2Q6P1R3 559 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 SCYL2Q6P3W7 929 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 TPRG1Q6ZUI0 275 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 ADAT2Q7Z6V5 191 aaKnown RBP12.35□□□□□ -0.43
GGA3-217ENST00000583667 SCD5Q86SK9 330 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 FAM160A2Q8N612 972 aaPredicted RBP12.35□□□□□ -0.43
GGA3-217ENST00000583667 ZNF461Q8TAF7 563 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 CCHCR1Q8TD31 782 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 C1orf54Q8WWF1 131 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 HSPH1Q92598 858 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 TTLL2Q9BWV7 592 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 FUT8Q9BYC5 575 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 RAB6CQ9H0N0 254 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 VIPAS39Q9H9C1 493 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 PIDD1Q9HB75 910 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 RXFP1Q9HBX9 757 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.35□□□□□ -0.43
GGA3-217ENST00000583667 ABI2Q9NYB9 513 aaPredicted RBP12.35□□□□□ -0.43
GGA3-217ENST00000583667 CALCOCO1Q9P1Z2 691 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 FNIP2Q9P278 1114 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 SSX2IPQ9Y2D8 614 aa12.35□□□□□ -0.43
GGA3-217ENST00000583667 R3HDM2Q9Y2K5 976 aaKnown RBP12.35□□□□□ -0.43
GGA3-217ENST00000583667 ZFP37Q9Y6Q3 630 aaPredicted RBP12.35□□□□□ -0.43
GGA3-217ENST00000583667 RALGAPA1Q6GYQ0 2036 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms