RNA–Protein interactions for RNA: ENST00000583569.5

NUP85-222, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-222	ENST00000583569	RFX6	Q8HWS3	928 aa		4.9	□□□□□ -1.63
NUP85-222	ENST00000583569	ADGRF3	Q8IZF5	1079 aa		4.9	□□□□□ -1.63
NUP85-222	ENST00000583569	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.9	□□□□□ -1.63
NUP85-222	ENST00000583569	KTI12	Q96EK9	354 aa	Predicted RBP	4.9	□□□□□ -1.63
NUP85-222	ENST00000583569	RBM17	Q96I25	401 aa	Known RBP	4.9	□□□□□ -1.63
NUP85-222	ENST00000583569	FCRL5	Q96RD9	977 aa		4.9	□□□□□ -1.63
NUP85-222	ENST00000583569	KRTAP4-7	Q9BYR0	210 aa		4.9	□□□□□ -1.63
NUP85-222	ENST00000583569	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.9	□□□□□ -1.63
NUP85-222	ENST00000583569	NOD2	Q9HC29	1040 aa		4.9	□□□□□ -1.63
NUP85-222	ENST00000583569	RASSF1	Q9NS23	344 aa		4.9	□□□□□ -1.63
NUP85-222	ENST00000583569	SPATA31A5	Q5VU36	1347 aa		4.9	□□□□□ -1.63
NUP85-222	ENST00000583569	SPATA31A7	Q8IWB4	1347 aa		4.9	□□□□□ -1.63
NUP85-222	ENST00000583569	RRN3P2	A6NIE6	340 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	AKR1A1	P14550	325 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	CHN1	P15882	459 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	TGM2	P21980	687 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	YPEL5	P62699	121 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	CDK18	Q07002	472 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	ANKRD1	Q15327	319 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	SMN1	Q16637	294 aa	Known RBP	4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	MIS18BP1	Q6P0N0	1132 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	RBM44	Q6ZP01	1051 aa	Known RBP	4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	LRRTM4	Q86VH4	590 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	PRIMA1	Q86XR5	153 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	RHPN2	Q8IUC4	686 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	LINS1	Q8NG48	757 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	ZNF398	Q8TD17	642 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	KCNJ9	Q92806	393 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	USP13	Q92995	863 aa	Predicted RBP	4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	TM2D2	Q9BX73	214 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	ARHGAP39	Q9C0H5	1083 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	CLPB	Q9H078	707 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	SLITRK6	Q9H5Y7	841 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	DNAJC16	Q9Y2G8	782 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	LRRFIP2	Q9Y608	721 aa	Known RBP	4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	EMSY	Q7Z589	1322 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	WDR17	Q8IZU2	1322 aa		4.89	□□□□□ -1.63
NUP85-222	ENST00000583569	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	DSCR3	O14972	297 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	INPPL1	O15357	1258 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	NCAM2	O15394	837 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	USP12	O75317	370 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	PLAU	P00749	431 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	PYGL	P06737	847 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	ACP5	P13686	325 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	CPA1	P15085	419 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	ST6GAL1	P15907	406 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	CNTF	P26441	200 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	CERS1	P27544	350 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	PNPLA4	P41247	253 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	B4GALNT1	Q00973	533 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	ALKBH1	Q13686	389 aa	Known RBP	4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	ZNF66	Q6ZN08	573 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	DNAJC10	Q8IXB1	793 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	ANKRD44	Q8N8A2	993 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	ENDOV	Q8N8Q3	282 aa	Known RBP	4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	DPF1	Q92782	380 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	KAT2B	Q92831	832 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	MAP4K1	Q92918	833 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	P2RY11	Q96G91	374 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	CRAMP1	Q96RY5	1269 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	NPAS1	Q99742	590 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	KRTAP4-9	Q9BYQ8	210 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	ERVK-5	Q9HDB9	667 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	MTMR4	Q9NYA4	1195 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	SLC25A13	Q9UJS0	675 aa		4.88	□□□□□ -1.63
NUP85-222	ENST00000583569	PPFIA2	O75334	1257 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	SGPL1	O95470	568 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	TUBB4A	P04350	444 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	POLB	P06746	335 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	CD63	P08962	238 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	CSF1	P09603	554 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	PRPH2	P23942	346 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	MPG	P29372	298 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	SOX2	P48431	317 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	UBE3A	Q05086	875 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	FOXF2	Q12947	444 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	ALF	Q53S48	1182 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	RUNDC3A	Q59EK9	446 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	CEP78	Q5JTW2	689 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	LIPM	Q5VYY2	423 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	ATP2A3	Q93084	1043 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	TWNK	Q96RR1	684 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	SH2D3A	Q9BRG2	576 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	GATA5	Q9BWX5	397 aa	Predicted RBP	4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	TRIM31	Q9BZY9	425 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	PDGFC	Q9NRA1	345 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	PTGFRN	Q9P2B2	879 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	KLHL13	Q9P2N7	655 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	PI4KB	Q9UBF8	816 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	IPO11	Q9UI26	975 aa	Known RBP	4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	SLC8A2	Q9UPR5	921 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	LMTK3	Q96Q04	1460 aa		4.87	□□□□□ -1.63
NUP85-222	ENST00000583569	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.86	□□□□□ -1.63
NUP85-222	ENST00000583569	SAC3D1	A6NKF1	404 aa		4.86	□□□□□ -1.63
NUP85-222	ENST00000583569	PPP6C	O00743	305 aa		4.86	□□□□□ -1.63
NUP85-222	ENST00000583569	RBMXL2	O75526	392 aa	Known RBP	4.86	□□□□□ -1.63
NUP85-222	ENST00000583569	LATS1	O95835	1130 aa		4.86	□□□□□ -1.63

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