RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 GET4Q7L5D6 327 aaPredicted RBP12.38□□□□□ -0.43
CCDC57-216ENST00000582885 C14orf80Q86SX3 495 aa12.38□□□□□ -0.43
CCDC57-216ENST00000582885 ZDHHC14Q8IZN3 488 aa12.38□□□□□ -0.43
CCDC57-216ENST00000582885 LZTR1Q8N653 840 aa12.38□□□□□ -0.43
CCDC57-216ENST00000582885 DEFB123Q8N688 67 aa12.38□□□□□ -0.43
CCDC57-216ENST00000582885 PLD5Q8N7P1 536 aa12.38□□□□□ -0.43
CCDC57-216ENST00000582885 C12orf50Q8NA57 414 aaPredicted RBP12.38□□□□□ -0.43
CCDC57-216ENST00000582885 SPATA4Q8NEY3 305 aa12.38□□□□□ -0.43
CCDC57-216ENST00000582885 ZYG11BQ9C0D3 744 aa12.38□□□□□ -0.43
CCDC57-216ENST00000582885 VANGL2Q9ULK5 521 aa12.38□□□□□ -0.43
CCDC57-216ENST00000582885 SNX10Q9Y5X0 201 aa12.38□□□□□ -0.43
CCDC57-216ENST00000582885 KIAA1549LQ6ZVL6 1849 aa12.38□□□□□ -0.43
CCDC57-216ENST00000582885 MYO10Q9HD67 2058 aa12.38□□□□□ -0.43
CCDC57-216ENST00000582885 CTAGE15A4D2H0 777 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 CTAGE8P0CG41 777 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 LAMP2P13473 410 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 SERPINB6P35237 376 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 TUBB4BP68371 445 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 SMAD4Q13485 552 aaKnown RBP12.37□□□□□ -0.43
CCDC57-216ENST00000582885 CCNG2Q16589 344 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 MPP7Q5T2T1 576 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 NCBP2-AS2Q69YL0 99 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 DRICH1Q6PGQ1 229 aaPredicted RBP12.37□□□□□ -0.43
CCDC57-216ENST00000582885 TMCO3Q6UWJ1 677 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 BZW1Q7L1Q6 419 aaKnown RBP12.37□□□□□ -0.43
CCDC57-216ENST00000582885 CHST9Q7L1S5 443 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 CTAGE6Q86UF2 777 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 NLRP14Q86W24 1093 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 CTAGE4Q8IX94 777 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 LGI2Q8N0V4 545 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 RTL3Q8N8U3 475 aaKnown RBP12.37□□□□□ -0.43
CCDC57-216ENST00000582885 PRELID2Q8N945 189 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 P3H4Q92791 437 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 CARD6Q9BX69 1037 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 SMG9Q9H0W8 520 aaKnown RBP12.37□□□□□ -0.43
CCDC57-216ENST00000582885 POMKQ9H5K3 350 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 LRRC19Q9H756 370 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 UBE2ZQ9H832 354 aaPredicted RBP12.37□□□□□ -0.43
CCDC57-216ENST00000582885 TMEM248Q9NWD8 314 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 ZNF212Q9UDV6 495 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 CDH22Q9UJ99 828 aa12.37□□□□□ -0.43
CCDC57-216ENST00000582885 USP15Q9Y4E8 981 aaPredicted RBP12.37□□□□□ -0.43
CCDC57-216ENST00000582885 GOLGA6L7A0A1B0GV03 622 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 NCAM2O15394 837 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 PHF2O75151 1096 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 ZNF189O75820 626 aaPredicted RBP12.36□□□□□ -0.43
CCDC57-216ENST00000582885 SLU7O95391 586 aaKnown RBP12.36□□□□□ -0.43
CCDC57-216ENST00000582885 FCARP24071 287 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 GGCXP38435 758 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 MAPKAPK2P49137 400 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 XRCC4Q13426 336 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 NOMO1Q15155 1222 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 LLGL1Q15334 1064 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 MPPE1Q53F39 396 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 RNF43Q68DV7 783 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 RWDD4Q6NW29 188 aaKnown RBP12.36□□□□□ -0.43
CCDC57-216ENST00000582885 OTOP3Q7RTS5 596 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 ADAT2Q7Z6V5 191 aaKnown RBP12.36□□□□□ -0.43
CCDC57-216ENST00000582885 BBS7Q8IWZ6 715 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 UMODL1-AS1Q8N2C9 162 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 HJURPQ8NCD3 748 aaPredicted RBP12.36□□□□□ -0.43
CCDC57-216ENST00000582885 RIN3Q8TB24 985 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 ACTL9Q8TC94 416 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 BPIFB1Q8TDL5 484 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 NKD2Q969F2 451 aaPredicted RBP12.36□□□□□ -0.43
CCDC57-216ENST00000582885 IGSF8Q969P0 613 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 RUNDC3BQ96NL0 473 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 RPRD1AQ96P16 312 aaPredicted RBP12.36□□□□□ -0.43
CCDC57-216ENST00000582885 MYADMQ96S97 322 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 AP1M1Q9BXS5 423 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 KLC2Q9H0B6 622 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 ZFP14Q9HCL3 533 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 SMARCAL1Q9NZC9 954 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 EPS15L1Q9UBC2 864 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 DRG1Q9Y295 367 aaKnown RBP12.36□□□□□ -0.43
CCDC57-216ENST00000582885 NR2E1Q9Y466 385 aa12.36□□□□□ -0.43
CCDC57-216ENST00000582885 TICRRQ7Z2Z1 1910 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 A0A1B0GVM2 712 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 TYW5A2RUC4 315 aaKnown RBP12.35□□□□□ -0.43
CCDC57-216ENST00000582885 GRXCR2A6NFK2 248 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 TCAF2A6NFQ2 919 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 MBTPS2O43462 519 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 CLDN11O75508 207 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 CHRNA3P32297 505 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 FNTAP49354 379 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 NDST2P52849 883 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 CDH4P55283 916 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 DYNLT1P63172 113 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 OTUD4Q01804 1114 aaKnown RBP12.35□□□□□ -0.43
CCDC57-216ENST00000582885 ZNF33AQ06730 810 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 ALFQ53S48 1182 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 AFMIDQ63HM1 303 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 RFWD3Q6PCD5 774 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 LRRC49Q8IUZ0 686 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 MMGT1Q8N4V1 131 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 SLC35B2Q8TB61 432 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 SLCO2A1Q92959 643 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 HLA-CQ95604 372 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 ELSPBP1Q96BH3 223 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 RSPRY1Q96DX4 576 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms