RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 TWF1Q12792 350 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 TAF10Q12962 218 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 CUL1Q13616 776 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 HLTFQ14527 1009 aaKnown RBP eCLIP12.99□□□□□ -0.33
SRSF1-204ENST00000581979 BEND6Q5SZJ8 279 aaPredicted RBP12.99□□□□□ -0.33
SRSF1-204ENST00000581979 DRICH1Q6PGQ1 229 aaPredicted RBP12.99□□□□□ -0.33
SRSF1-204ENST00000581979 SYDE1Q6ZW31 735 aaPredicted RBP12.99□□□□□ -0.33
SRSF1-204ENST00000581979 DDX42Q86XP3 938 aaKnown RBP eCLIP12.99□□□□□ -0.336e-8■■□□□ 14.2
SRSF1-204ENST00000581979 PYROXD2Q8N2H3 581 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 DTWD2Q8NBA8 298 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 ACTL9Q8TC94 416 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 NTAN1Q96AB6 310 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 FAF2Q96CS3 445 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 CEP295NLQ96MC4 621 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 ZNF512Q96ME7 567 aaPredicted RBP12.99□□□□□ -0.33
SRSF1-204ENST00000581979 MAGEB5Q9BZ81 275 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 TLR8Q9NR97 1041 aaKnown RBP12.99□□□□□ -0.33
SRSF1-204ENST00000581979 TMPRSS4Q9NRS4 437 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 IL37Q9NZH6 218 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 DNPEPQ9ULA0 475 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 NFU1Q9UMS0 254 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 MAGED2Q9UNF1 606 aaPredicted RBP12.99□□□□□ -0.33
SRSF1-204ENST00000581979 ZNF148Q9UQR1 794 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 BHMG1C9JSJ3 638 aaPredicted RBP12.99□□□□□ -0.33
SRSF1-204ENST00000581979 H3BRJ5 948 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 STK25O00506 426 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 DAPK3O43293 454 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 ATF6P18850 670 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 TGM2P21980 687 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 NBL1P41271 181 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 TNNT3P45378 269 aaPredicted RBP12.99□□□□□ -0.33
SRSF1-204ENST00000581979 CXCR3P49682 368 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 PGFP49763 221 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 PSEN1P49768 467 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 PFKPQ01813 784 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 TRADDQ15628 312 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 C1orf228Q6PIY5 440 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 PDZD4Q76G19 769 aaPredicted RBP12.99□□□□□ -0.33
SRSF1-204ENST00000581979 PCDH19Q8TAB3 1148 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 P3H4Q92791 437 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 ELSPBP1Q96BH3 223 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 TCEAL4Q96EI5 215 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 SHDQ96IW2 340 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 KXD1Q9BQD3 176 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 TKTL2Q9H0I9 626 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 OSER1Q9NX31 292 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 RCOR3Q9P2K3 495 aaPredicted RBP12.99□□□□□ -0.33
SRSF1-204ENST00000581979 HSFX1Q9UBD0 423 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 SAE1Q9UBE0 346 aaPredicted RBP12.99□□□□□ -0.33
SRSF1-204ENST00000581979 SFMBT1Q9UHJ3 866 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 NUDT5Q9UKK9 219 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 SNX24Q9Y343 169 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 YIPF1Q9Y548 306 aa12.99□□□□□ -0.33
SRSF1-204ENST00000581979 FAM92AA1XBS5 289 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 MCF2LO15068 1137 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 IRAK2O43187 625 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 CREB3O43889 395 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 MOSPD3O75425 235 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 IGLV3-25P01717 112 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 RARGP13631 454 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 PECAM1P16284 738 aaPredicted RBP12.98□□□□□ -0.33
SRSF1-204ENST00000581979 ZFXP17010 805 aaPredicted RBP12.98□□□□□ -0.33
SRSF1-204ENST00000581979 GOT1P17174 413 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 FCARP24071 287 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 SCAPQ12770 1279 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 PLD1Q13393 1074 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 PTK6Q13882 451 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 DUPD1Q68J44 220 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 NPNTQ6UXI9 565 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 HS6ST3Q8IZP7 471 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 PQLC3Q8N755 202 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 AENQ8WTP8 325 aaKnown RBP12.98□□□□□ -0.33
SRSF1-204ENST00000581979 SEC14L1Q92503 715 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 SERPINB11Q96P15 392 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 CSPG4P5Q96PW8 444 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 CWC15Q9P013 229 aaKnown RBP12.98□□□□□ -0.33
SRSF1-204ENST00000581979 DLGAP2Q9P1A6 1054 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 ASIC3Q9UHC3 531 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 DRG1Q9Y295 367 aaKnown RBP12.98□□□□□ -0.33
SRSF1-204ENST00000581979 SIT1Q9Y3P8 196 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 VPS13AQ96RL7 3174 aa12.98□□□□□ -0.33
SRSF1-204ENST00000581979 ZFHX2Q9C0A1 2572 aaPredicted RBP12.97□□□□□ -0.33
SRSF1-204ENST00000581979 EEF2KO00418 725 aaKnown RBP12.97□□□□□ -0.33
SRSF1-204ENST00000581979 NRG2O14511 850 aaPredicted RBP12.97□□□□□ -0.33
SRSF1-204ENST00000581979 KRT14P02533 472 aa12.97□□□□□ -0.33
SRSF1-204ENST00000581979 ITGAVP06756 1048 aa12.97□□□□□ -0.33
SRSF1-204ENST00000581979 ALDH1A3P47895 512 aa12.97□□□□□ -0.33
SRSF1-204ENST00000581979 EIF3EP60228 445 aaKnown RBP12.97□□□□□ -0.33
SRSF1-204ENST00000581979 PRKCQQ04759 706 aa12.97□□□□□ -0.33
SRSF1-204ENST00000581979 NOMO1Q15155 1222 aa12.97□□□□□ -0.33
SRSF1-204ENST00000581979 TRIP13Q15645 432 aaPredicted RBP12.97□□□□□ -0.33
SRSF1-204ENST00000581979 SLC44A4Q53GD3 710 aa12.97□□□□□ -0.33
SRSF1-204ENST00000581979 FAM78AQ5JUQ0 283 aa12.97□□□□□ -0.33
SRSF1-204ENST00000581979 BRMS1LQ5PSV4 323 aa12.97□□□□□ -0.33
SRSF1-204ENST00000581979 SLC9A4Q6AI14 798 aa12.97□□□□□ -0.33
SRSF1-204ENST00000581979 TANGO2Q6ICL3 276 aa12.97□□□□□ -0.33
SRSF1-204ENST00000581979 MSANTD2Q6P1R3 559 aa12.97□□□□□ -0.33
SRSF1-204ENST00000581979 PLD5Q8N7P1 536 aa12.97□□□□□ -0.33
SRSF1-204ENST00000581979 EIF1ADQ8N9N8 165 aaKnown RBP12.97□□□□□ -0.33
SRSF1-204ENST00000581979 SLC35B2Q8TB61 432 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms