RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 STIM2Q9P246 746 aa17.55■□□□□ 0.4
CDC42EP4-206ENST00000581014 SUN2Q9UH99 717 aa17.55■□□□□ 0.4
CDC42EP4-206ENST00000581014 INTS6Q9UL03 887 aaKnown RBP17.55■□□□□ 0.4
CDC42EP4-206ENST00000581014 SIK3Q9Y2K2 1263 aa17.55■□□□□ 0.4
CDC42EP4-206ENST00000581014 F5H5T6 163 aa17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 ITPKAP23677 461 aa17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 TPMTP51580 245 aa17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 COPB1P53618 953 aaKnown RBP17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 JAM2P57087 298 aa17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 IRX4P78413 519 aa17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 SLC12A1Q13621 1099 aa17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 CDH18Q13634 790 aa17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 NCAPHQ15003 741 aa17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 FNDC3BQ53EP0 1204 aaKnown RBP17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 FSCBQ5H9T9 825 aa17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 RAP1GAP2Q684P5 730 aa17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 ARCQ7LC44 396 aa17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 CHSY1Q86X52 802 aa17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 SLC41A1Q8IVJ1 513 aa17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 LGI2Q8N0V4 545 aa17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 CFAP52Q8N1V2 620 aa17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 ANKRD20A12PQ8NF67 263 aa17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 MYO19Q96H55 970 aa17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 NPY6RQ99463 290 aa17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 EDEM2Q9BV94 578 aa17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 HSD3B7Q9H2F3 369 aa17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 KIAA1522Q9P206 1035 aaPredicted RBP17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 NOCTQ9UK39 431 aaKnown RBP17.54■□□□□ 0.4
CDC42EP4-206ENST00000581014 TPRP12270 2363 aaKnown RBP17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 LGALS16A8MUM7 142 aa17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 PATE3B3GLJ2 98 aa17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 CDX4O14627 284 aaPredicted RBP17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 GRAP2O75791 330 aa17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 HLA-EP13747 358 aa17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 CSKP41240 450 aa17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 C5orf22Q49AR2 442 aa17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 TRIM61Q5EBN2 209 aa17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 OTUD1Q5VV17 481 aaPredicted RBP17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 ARMCX6Q7L4S7 300 aa17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 APTXQ7Z2E3 356 aaKnown RBP17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 ERICH1Q86X53 443 aa17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 XYLT1Q86Y38 959 aa17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 CARNMT1Q8N4J0 409 aa17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 DNASE2BQ8WZ79 361 aa17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 TOE1Q96GM8 510 aaKnown RBP17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 MRGPRX3Q96LB0 322 aa17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 PCED1AQ9H1Q7 454 aa17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 CAPN10Q9HC96 672 aa17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 CD93Q9NPY3 652 aa17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 PRSS16Q9NQE7 514 aa17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.53■□□□□ 0.43e-6■■■■□ 22.8
CDC42EP4-206ENST00000581014 STAP1Q9ULZ2 295 aa17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 PI4KAP42356 2102 aa17.53■□□□□ 0.4
CDC42EP4-206ENST00000581014 A0A1B0GVM2 712 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 TCAF2A6NFQ2 919 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 H0Y626 953 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 NDUFS2O75306 463 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 MOCS3O95396 460 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 F9P00740 461 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 SRPRAP08240 638 aaKnown RBP17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 SERPINF2P08697 491 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 SOX5P35711 763 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 CXCR3P49682 368 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 KLK7P49862 253 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 VASPP50552 380 aaPredicted RBP17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 PLK1P53350 603 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 OXCT1P55809 520 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 POLR2FP61218 127 aaKnown RBP17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 NOMO3P69849 1222 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 CDR2Q01850 454 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 DUOXA1Q1HG43 343 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 HNRNPA1L2Q32P51 320 aaKnown RBP17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 PLEKHG6Q3KR16 790 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 PITRM1Q5JRX3 1037 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 RABGAP1LQ5R372 815 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 ACBD5Q5T8D3 534 aaPredicted RBP17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 FBXL22Q6P050 247 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 MSANTD4Q8NCY6 345 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 RNF34Q969K3 372 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 ERLEC1Q96DZ1 483 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 HSPA12BQ96MM6 686 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 ERGIC2Q96RQ1 377 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 NUP58Q9BVL2 599 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 NUSAP1Q9BXS6 441 aaKnown RBP17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 TMEM9BQ9NQ34 198 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 FAM207AQ9NSI2 230 aaPredicted RBP17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 ARHGEF38Q9NXL2 777 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 SLC6A14Q9UN76 642 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 ADAMTS9Q9P2N4 1935 aa17.52■□□□□ 0.4
CDC42EP4-206ENST00000581014 CKAP5Q14008 2032 aa17.52■□□□□ 0.39
CDC42EP4-206ENST00000581014 C4orf47A7E2U8 309 aa17.51■□□□□ 0.39
CDC42EP4-206ENST00000581014 M0QYT0 321 aa17.51■□□□□ 0.39
CDC42EP4-206ENST00000581014 EPHB6O15197 1021 aa17.51■□□□□ 0.39
CDC42EP4-206ENST00000581014 CYP1A1P04798 512 aaPredicted RBP17.51■□□□□ 0.39
CDC42EP4-206ENST00000581014 MMEP08473 750 aa17.51■□□□□ 0.39
CDC42EP4-206ENST00000581014 ADRB1P08588 477 aa17.51■□□□□ 0.39
CDC42EP4-206ENST00000581014 ACADMP11310 421 aa17.51■□□□□ 0.39
CDC42EP4-206ENST00000581014 ST8SIA6P61647 398 aa17.51■□□□□ 0.39
CDC42EP4-206ENST00000581014 AUHQ13825 339 aaKnown RBP17.51■□□□□ 0.39
CDC42EP4-206ENST00000581014 SLC25A52Q3SY17 297 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms