RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 CCDC150Q8NCX0 1101 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 C1orf131Q8NDD1 294 aaKnown RBP3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 NEK11Q8NG66 645 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 ATXN2LQ8WWM7 1075 aaKnown RBP3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 PPM1EQ8WY54 764 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 OVCA2Q8WZ82 227 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 NDRG1Q92597 394 aaKnown RBP3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 FGF13Q92913 245 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 PPP2R3CQ969Q6 453 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 NT5C3BQ969T7 300 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 WBP2Q969T9 261 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 PDLIM2Q96JY6 352 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 HEXIM2Q96MH2 286 aaKnown RBP3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 NECAB3Q96P71 396 aaPredicted RBP3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 ASB2Q96Q27 587 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 RPP25Q9BUL9 199 aaKnown RBP3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 SLC46A2Q9BY10 475 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 ULBP1Q9BZM6 244 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 RNF38Q9H0F5 515 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 WDR26Q9H7D7 661 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 KCNK12Q9HB15 430 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 TRPV4Q9HBA0 871 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 COMMD8Q9NX08 183 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 TAS2R14Q9NYV8 317 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 GMIPQ9P107 970 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 EPS15L1Q9UBC2 864 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 SCML2Q9UQR0 700 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 USTQ9Y2C2 406 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 MYRFQ9Y2G1 1151 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 PLXNA2O75051 1894 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 ZDBF2Q9HCK1 2354 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 ZNF106Q9H2Y7 1883 aaKnown RBP3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 A0A087X0T9 212 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 E5RJQ4 531 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 M0QYV0 167 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 COCHO43405 550 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 RTN3O95197 1032 aaPredicted RBP3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 LCA5LO95447 670 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 ADCY5O95622 1261 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 LSM8O95777 96 aaKnown RBP3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 IGLV3-27P01718 113 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 LRG1P02750 347 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 FAM228BP0C875 321 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 CSH1P0DML2 217 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 CSH2P0DML3 217 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 SKILP12757 684 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 LAMP2P13473 410 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 KRT5P13647 590 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 CD19P15391 556 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 FERP16591 822 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 TFE3P19532 575 aaPredicted RBP3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 ITIH2P19823 946 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 YWHAQP27348 245 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 GABRR2P28476 465 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 ELF1P32519 619 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 CA8P35219 290 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 KRT9P35527 623 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 ALDH1A3P47895 512 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 RGS7P49802 495 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 TUBP50607 506 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 TKTL1P51854 596 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 EPHB3P54753 998 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 SLC7A9P82251 487 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 CDK17Q00537 523 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 OGDHQ02218 1023 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 ADIGQ0VDE8 80 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 TAF10Q12962 218 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 ZNF268Q14587 947 aaPredicted RBP3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 TAF5Q15542 800 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 TEAD2Q15562 447 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 ZNF77Q15935 545 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 CLEC16AQ2KHT3 1053 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 FILIP1LQ4L180 1135 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 PABPC1LQ4VXU2 614 aaKnown RBP3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 RAB6CQ53S08 254 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 C2CD6Q53TS8 623 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 FAM78AQ5JUQ0 283 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 TAF3Q5VWG9 929 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 VITQ6UXI7 678 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 FAM183BPQ6ZVS7 135 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 CYP4V2Q6ZWL3 525 aaPredicted RBP3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 BEND5Q7L4P6 421 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 SLC26A9Q7LBE3 791 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 ITIH5Q86UX2 942 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 MON1AQ86VX9 555 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 XYLT1Q86Y38 959 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 DNAAF5Q86Y56 855 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 PASD1Q8IV76 773 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 SCN4BQ8IWT1 228 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 ADHFE1Q8IWW8 467 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 DRC7Q8IY82 874 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 LEMD2Q8NC56 503 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 ANKRD20A12PQ8NF67 263 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 ZNF397Q8NF99 534 aaPredicted RBP3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 ING5Q8WYH8 240 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 IRGQQ8WZA9 623 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 FGF14Q92915 247 aa3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 USP13Q92995 863 aaPredicted RBP3.97□□□□□ -1.77
SMARCE1-215ENST00000578995 NXPE3Q969Y0 559 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms