RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 SEPT3Q9UH03 358 aa6.58□□□□□ -1.36
UBB-208ENST00000578706 L1RE1Q9UN81 338 aa6.58□□□□□ -1.36
UBB-208ENST00000578706 AGAP1Q9UPQ3 857 aa6.58□□□□□ -1.36
UBB-208ENST00000578706 TRAF3IP3Q9Y228 551 aa6.58□□□□□ -1.36
UBB-208ENST00000578706 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.58□□□□□ -1.36
UBB-208ENST00000578706 LRRK1Q38SD2 2015 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 UBE4BO95155 1302 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 NPHP3-ACAD11A0A0J9YXS1 232 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 PMS2P1A4D2B8 440 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 RNF225M0QZC1 329 aaPredicted RBP6.57□□□□□ -1.36
UBB-208ENST00000578706 PDXKO00764 312 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 CETN3O15182 167 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 EIF3DO15371 548 aaKnown RBP eCLIP6.57□□□□□ -1.36
UBB-208ENST00000578706 CALUO43852 315 aaPredicted RBP6.57□□□□□ -1.36
UBB-208ENST00000578706 NDUFA10O95299 355 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 IPO7O95373 1038 aaKnown RBP6.57□□□□□ -1.36
UBB-208ENST00000578706 MT-CO3P00414 261 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 MBL2P11226 248 aaPredicted RBP6.57□□□□□ -1.36
UBB-208ENST00000578706 RPL13P26373 211 aaKnown RBP6.57□□□□□ -1.36
UBB-208ENST00000578706 POLR2BP30876 1174 aaKnown RBP6.57□□□□□ -1.36
UBB-208ENST00000578706 ACSL1P33121 698 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 LSSP48449 732 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 KRT83P78385 493 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 TFAMQ00059 246 aaKnown RBP6.57□□□□□ -1.36
UBB-208ENST00000578706 CYP27A1Q02318 531 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 SRSF6Q13247 344 aaKnown RBP6.57□□□□□ -1.36
UBB-208ENST00000578706 CLN3Q13286 438 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 ILKQ13418 452 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 STARD3Q14849 445 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 MAPRE1Q15691 268 aaKnown RBP6.57□□□□□ -1.36
UBB-208ENST00000578706 NFIL3Q16649 462 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 SFMBT2Q5VUG0 894 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 CDCP2Q5VXM1 449 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 TDRD10Q5VZ19 366 aaKnown RBP6.57□□□□□ -1.36
UBB-208ENST00000578706 GRAMD4Q6IC98 578 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 SLFN12LQ6IEE8 588 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 FAM171BQ6P995 826 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 CCDC81Q6ZN84 652 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 KANSL1Q7Z3B3 1105 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 SFR1Q86XK3 245 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 CACUL1Q86Y37 369 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 TMEM25Q86YD3 366 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 TRIM59Q8IWR1 403 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 MYCT1Q8N699 235 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 SNX19Q92543 992 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 WBP2Q969T9 261 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 SLITRK1Q96PX8 696 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 SEMA3CQ99985 751 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 REEP2Q9BRK0 252 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 DESI2Q9BSY9 194 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 NUCKS1Q9H1E3 243 aaKnown RBP6.57□□□□□ -1.36
UBB-208ENST00000578706 PDCL3Q9H2J4 239 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 MRPL44Q9H9J2 332 aaKnown RBP6.57□□□□□ -1.36
UBB-208ENST00000578706 LRRC4CQ9HCJ2 640 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 SPHK2Q9NRA0 654 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 AGO2Q9UKV8 859 aaKnown RBP6.57□□□□□ -1.36
UBB-208ENST00000578706 ODF2LQ9ULJ1 636 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 SIK3Q9Y2K2 1263 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 SH3BP1Q9Y3L3 701 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 SNX9Q9Y5X1 595 aa6.57□□□□□ -1.36
UBB-208ENST00000578706 EPN1Q9Y6I3 576 aaPredicted RBP6.57□□□□□ -1.36
UBB-208ENST00000578706 NAV3Q8IVL0 2385 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 EIF3CLB5ME19 914 aaKnown RBP6.56□□□□□ -1.36
UBB-208ENST00000578706 K7ENM7 598 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 GFRA2O00451 464 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 GABRDO14764 452 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 SLC16A3O15427 465 aaKnown RBP6.56□□□□□ -1.36
UBB-208ENST00000578706 HCRTO43612 131 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 USP12O75317 370 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 URI1O94763 535 aaPredicted RBP6.56□□□□□ -1.36
UBB-208ENST00000578706 FAM13AO94988 1023 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 IL18RAPO95256 599 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 OAS1P00973 400 aaKnown RBP6.56□□□□□ -1.36
UBB-208ENST00000578706 WNT1P04628 370 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 ITGB3P05106 788 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 KRT19P08727 400 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 RNF224P0DH78 156 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 BDNFP23560 247 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 EPHA8P29322 1005 aaPredicted RBP6.56□□□□□ -1.36
UBB-208ENST00000578706 ZNF131P52739 623 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 ZNF132P52740 706 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 COPAP53621 1224 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 TUBB4BP68371 445 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 NOP14P78316 857 aaKnown RBP6.56□□□□□ -1.36
UBB-208ENST00000578706 RBP5P82980 135 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 TAF10Q12962 218 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 ALCAMQ13740 583 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 ENPP2Q13822 863 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 TEAD4Q15561 434 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 KNOP1Q1ED39 458 aaKnown RBP6.56□□□□□ -1.36
UBB-208ENST00000578706 SKIDA1Q1XH10 827 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 PROX2Q3B8N5 592 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 SLC39A4Q6P5W5 647 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 WDR59Q6PJI9 974 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 DPH6Q7L8W6 267 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 FAM124AQ86V42 546 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 TICAM1Q8IUC6 712 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 BBS7Q8IWZ6 715 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 NELFCDQ8IXH7 590 aa6.56□□□□□ -1.36
UBB-208ENST00000578706 ADGRF2Q8IZF7 708 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms