RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 HBS1LQ9Y450 684 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 PCDHB1Q9Y5F3 818 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 TBC1D3DA0A087WVF3 549 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 TBC1D3IA0A087WXS9 549 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 TBC1D3EA0A087X179 549 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 TBC1D3KA0A087X1G2 549 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 TBC1D3FA6NER0 549 aaPredicted RBP10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 YJEFN3A6XGL0 299 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 TTC34A8MYJ7 566 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 C10orf142B7Z368 130 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 TBC1D3LB9A6J9 549 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 E7ENQ6 273 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 ERVH48-1M5A8F1 160 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 PDXKO00764 312 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 RNASEH1O60930 286 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 SDC3O75056 442 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 MT-CO3P00414 261 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 SLFN14P0C7P3 912 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 TBC1D3HP0C7X1 549 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 KRT10P13645 584 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 CSKP41240 450 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 CTSOP43234 321 aaPredicted RBP10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 RXRGP48443 463 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 ST8SIA6P61647 398 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 ILKQ13418 452 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 LY6DQ14210 128 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 HNRNPA1L2Q32P51 320 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 KMT5BQ4FZB7 885 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 SFMBT2Q5VUG0 894 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 ARHGAP17Q68EM7 881 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 TBC1D3GQ6DHY5 549 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 TBC1D3CQ6IPX1 549 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 MMS22LQ6ZRQ5 1243 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 KANSL1Q7Z3B3 1105 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 TBC1D3Q8IZP1 549 aaPredicted RBP10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 CACTIN-AS1Q8N1I8 211 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 AADATQ8N5Z0 425 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 DCBLD1Q8N8Z6 715 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 OR14C36Q8NHC7 312 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 UBA3Q8TBC4 463 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 SEMA4DQ92854 862 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 TATDN2Q93075 761 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 TTC17Q96AE7 1141 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 FAM129BQ96TA1 746 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 IMPG2Q9BZV3 1241 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 CAAP1Q9H8G2 361 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 LRRC4Q9HBW1 653 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 CISHQ9NSE2 258 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 OLA1Q9NTK5 396 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 SLCO3A1Q9UIG8 710 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 FRMD4BQ9Y2L6 1034 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 NAV2Q8IVL1 2488 aa10.51□□□□□ -0.73
NPLOC4-220ENST00000576940 CAPN8A6NHC0 703 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 TRIM38O00635 465 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 YKT6O15498 198 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 SIGLEC6O43699 453 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 MPOP05164 745 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 ACP1P24666 158 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 PSMD8P48556 350 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 NUMBP49757 651 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 CCR5P51681 352 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 ZNF445P59923 1031 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 PPP2CBP62714 309 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 PPP2CAP67775 309 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 SFSWAPQ12872 951 aaKnown RBP10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 PROX2Q3B8N5 592 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 FOXD4L6Q3SYB3 417 aaPredicted RBP10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 FAM133BQ5BKY9 247 aaKnown RBP10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 FSCBQ5H9T9 825 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 FOXD4L3Q6VB84 417 aaPredicted RBP10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 SND1Q7KZF4 910 aaKnown RBP eCLIP10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 MFN1Q8IWA4 741 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 SLC25A45Q8N413 288 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 CARNMT1Q8N4J0 409 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 FAM181AQ8N9Y4 354 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 CCDC150Q8NCX0 1101 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 ZNF248Q8NDW4 579 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 FIBINQ8TAL6 211 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 RFFLQ8WZ73 363 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 DNAI2Q9GZS0 605 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 ERVMER34-1Q9H9K5 563 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 MAGEF1Q9HAY2 307 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 ARHGAP20Q9P2F6 1191 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 ADAMTS1Q9UHI8 967 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 SERTAD1Q9UHV2 236 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 ERVW-1Q9UQF0 538 aa10.5□□□□□ -0.73
NPLOC4-220ENST00000576940 DOCK9Q9BZ29 2069 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 MYO18BQ8IUG5 2567 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 TARSL2A2RTX5 802 aaKnown RBP10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 B8ZZF3 427 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 PIK3R2O00459 728 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 ACSL4O60488 711 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 LATS1O95835 1130 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 MYF5P13349 255 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 LCP1P13796 627 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 GOT1P17174 413 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 MAT2AP31153 395 aaKnown RBP10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 METAP1P53582 386 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 ADPRHP54922 357 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms