RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 USP30Q70CQ3 517 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 TMPRSS7Q7RTY8 843 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 CCDC117Q8IWD4 279 aaPredicted RBP10.84□□□□□ -0.67
TVP23B-208ENST00000575261 GALNT15Q8N3T1 639 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 FIBINQ8TAL6 211 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 SPATA20Q8TB22 786 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 CLEC4CQ8WTT0 213 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 MYO19Q96H55 970 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 CEP63Q96MT8 703 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 MIS12Q9H081 205 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 RSPH9Q9H1X1 276 aaPredicted RBP10.84□□□□□ -0.67
TVP23B-208ENST00000575261 PABPC3Q9H361 631 aaKnown RBP10.84□□□□□ -0.67
TVP23B-208ENST00000575261 STIM2Q9P246 746 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 NCKAP1Q9Y2A7 1128 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 BTBD3Q9Y2F9 522 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 GPSM3Q9Y4H4 160 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 PLXNA2O75051 1894 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 FASNP49327 2511 aaKnown RBP10.84□□□□□ -0.67
TVP23B-208ENST00000575261 GOLGA6L7A0A1B0GV03 622 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 GOLGA8CPA6NN73 597 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 P4HA2O15460 535 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 PCDHGA12O60330 932 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 GABBR2O75899 941 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 IGHV4-34P06331 123 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 ATXN1LP0C7T5 689 aaKnown RBP10.83□□□□□ -0.68
TVP23B-208ENST00000575261 PPP1R2P41236 205 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 CTSKP43235 329 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 RACK1P63244 317 aaKnown RBP10.83□□□□□ -0.68
TVP23B-208ENST00000575261 GCNT1Q02742 428 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 COL9A2Q14055 689 aaPredicted RBP10.83□□□□□ -0.68
TVP23B-208ENST00000575261 CST6Q15828 149 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 HNRNPA1L2Q32P51 320 aaKnown RBP10.83□□□□□ -0.68
TVP23B-208ENST00000575261 KIAA0895LQ68EN5 471 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 NADSYN1Q6IA69 706 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 CARNMT1Q8N4J0 409 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 KDM1BQ8NB78 822 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 MDM1Q8TC05 714 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 DQX1Q8TE96 717 aaKnown RBP10.83□□□□□ -0.68
TVP23B-208ENST00000575261 GANCQ8TET4 914 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 KAT5Q92993 513 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 TTC17Q96AE7 1141 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 FAM149B1Q96BN6 582 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 DHTKD1Q96HY7 919 aaPredicted RBP10.83□□□□□ -0.68
TVP23B-208ENST00000575261 LMLNQ96KR4 655 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 FCRL2Q96LA5 508 aaPredicted RBP10.83□□□□□ -0.68
TVP23B-208ENST00000575261 ZSWIM1Q9BR11 485 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 TRIM62Q9BVG3 475 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 ACE2Q9BYF1 805 aaPredicted RBP10.83□□□□□ -0.68
TVP23B-208ENST00000575261 NUCKS1Q9H1E3 243 aaKnown RBP10.83□□□□□ -0.68
TVP23B-208ENST00000575261 FBXL12Q9NXK8 326 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 TLR6Q9Y2C9 796 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 ADAMTS20P59510 1910 aa10.83□□□□□ -0.68
TVP23B-208ENST00000575261 COL5A1P20908 1838 aaPredicted RBP10.82□□□□□ -0.68
TVP23B-208ENST00000575261 A0A1W2PPC4 97 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 FAM47DPA6NHR8 397 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 LRRC72A6NJI9 287 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 H0Y8X5 98 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 RNF225M0QZC1 329 aaPredicted RBP10.82□□□□□ -0.68
TVP23B-208ENST00000575261 MID1O15344 667 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 PAPSS1O43252 624 aaPredicted RBP10.82□□□□□ -0.68
TVP23B-208ENST00000575261 TNFSF14O43557 240 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 DFNA5O60443 496 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 SIN3BO75182 1162 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 LUC7L3O95232 432 aaKnown RBP10.82□□□□□ -0.68
TVP23B-208ENST00000575261 MOCS3O95396 460 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 MOCS2O96007 188 aaPredicted RBP10.82□□□□□ -0.68
TVP23B-208ENST00000575261 APOEP02649 317 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 SRPRAP08240 638 aaKnown RBP10.82□□□□□ -0.68
TVP23B-208ENST00000575261 ACADSBP45954 432 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 C21orf59P57076 290 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 RPS24P62847 133 aaKnown RBP10.82□□□□□ -0.68
TVP23B-208ENST00000575261 ARID5BQ14865 1188 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 MS4A13Q5J8X5 152 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 PITRM1Q5JRX3 1037 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 RNF219Q5W0B1 726 aaPredicted RBP10.82□□□□□ -0.68
TVP23B-208ENST00000575261 TAC4Q86UU9 113 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 DHX40Q8IX18 779 aaKnown RBP10.82□□□□□ -0.68
TVP23B-208ENST00000575261 ERCC4Q92889 916 aaPredicted RBP10.82□□□□□ -0.68
TVP23B-208ENST00000575261 SKA1Q96BD8 255 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 SLC39A13Q96H72 371 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 MRGPRX3Q96LB0 322 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 SLC6A18Q96N87 628 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 ORAI3Q9BRQ5 295 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 MTG2Q9H4K7 406 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 ST7Q9NRC1 585 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 DKK4Q9UBT3 224 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 FTSJ1Q9UET6 329 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 SERGEFQ9UGK8 458 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 INTS6Q9UL03 887 aaKnown RBP10.82□□□□□ -0.68
TVP23B-208ENST00000575261 FZD4Q9ULV1 537 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 CEP83Q9Y592 693 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 ITIH6Q6UXX5 1313 aa10.82□□□□□ -0.68
TVP23B-208ENST00000575261 EDDM13A0A1B0GTR0 161 aa10.81□□□□□ -0.68
TVP23B-208ENST00000575261 A0A1W2PP55 124 aa10.81□□□□□ -0.68
TVP23B-208ENST00000575261 TARSL2A2RTX5 802 aaKnown RBP10.81□□□□□ -0.68
TVP23B-208ENST00000575261 KCNK3O14649 394 aa10.81□□□□□ -0.68
TVP23B-208ENST00000575261 CAPN9O14815 690 aa10.81□□□□□ -0.68
TVP23B-208ENST00000575261 VILLO15195 856 aa10.81□□□□□ -0.68
TVP23B-208ENST00000575261 RNASEH2AO75792 299 aaKnown RBP10.81□□□□□ -0.68
TVP23B-208ENST00000575261 ADH1BP00325 375 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms