RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 TERB1Q8NA31 727 aa11.4□□□□□ -0.58
CHD3-216ENST00000573936 SUMF1Q8NBK3 374 aa11.4□□□□□ -0.58
CHD3-216ENST00000573936 WFIKKN2Q8TEU8 576 aa11.4□□□□□ -0.58
CHD3-216ENST00000573936 CTNNBL1Q8WYA6 563 aaPredicted RBP11.4□□□□□ -0.58
CHD3-216ENST00000573936 PRMT1Q99873 361 aaKnown RBP11.4□□□□□ -0.58
CHD3-216ENST00000573936 ADAM33Q9BZ11 813 aa11.4□□□□□ -0.58
CHD3-216ENST00000573936 SIK2Q9H0K1 926 aa11.4□□□□□ -0.58
CHD3-216ENST00000573936 THAP2Q9H0W7 228 aa11.4□□□□□ -0.58
CHD3-216ENST00000573936 RBM12Q9NTZ6 932 aaKnown RBP11.4□□□□□ -0.58
CHD3-216ENST00000573936 CALCOCO1Q9P1Z2 691 aa11.4□□□□□ -0.58
CHD3-216ENST00000573936 XPO7Q9UIA9 1087 aaKnown RBP11.4□□□□□ -0.58
CHD3-216ENST00000573936 LCMT1Q9UIC8 334 aa11.4□□□□□ -0.58
CHD3-216ENST00000573936 NENFQ9UMX5 172 aa11.4□□□□□ -0.58
CHD3-216ENST00000573936 PCDHGA2Q9Y5H1 932 aa11.4□□□□□ -0.58
CHD3-216ENST00000573936 HS3ST4Q9Y661 456 aa11.4□□□□□ -0.58
CHD3-216ENST00000573936 EPG5Q9HCE0 2579 aa11.4□□□□□ -0.58
CHD3-216ENST00000573936 CHURC1-FNTBB4DL54 471 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 CCP110O43303 1012 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 ATMINO43313 823 aaPredicted RBP11.39□□□□□ -0.59
CHD3-216ENST00000573936 RNF40O75150 1001 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 PAGE1O75459 146 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 CYP1A2P05177 515 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 ADRA1BP35368 520 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 CCR3P51677 355 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 ATXN1P54253 815 aaKnown RBP11.39□□□□□ -0.59
CHD3-216ENST00000573936 OXCT1P55809 520 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 LMNB2Q03252 620 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 AUHQ13825 339 aaKnown RBP11.39□□□□□ -0.59
CHD3-216ENST00000573936 PIGHQ14442 188 aaPredicted RBP11.39□□□□□ -0.59
CHD3-216ENST00000573936 RNF43Q68DV7 783 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 NAIF1Q69YI7 327 aaPredicted RBP11.39□□□□□ -0.59
CHD3-216ENST00000573936 FBXL22Q6P050 247 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 TRMT11Q7Z4G4 463 aaKnown RBP11.39□□□□□ -0.59
CHD3-216ENST00000573936 ANKS1BQ7Z6G8 1248 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 SLFN11Q7Z7L1 901 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 TMTC1Q8IUR5 882 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 MFN1Q8IWA4 741 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 FIBINQ8TAL6 211 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 UCMAQ8WVF2 138 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 NTAN1Q96AB6 310 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 ACDQ96AP0 544 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 PRICKLE1Q96MT3 831 aaPredicted RBP11.39□□□□□ -0.59
CHD3-216ENST00000573936 RPRD1AQ96P16 312 aaPredicted RBP11.39□□□□□ -0.59
CHD3-216ENST00000573936 PPP1R9BQ96SB3 815 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 OSBPL2Q9H1P3 480 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 RETREG1Q9H6L5 497 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 LUC7LQ9NQ29 371 aaKnown RBP11.39□□□□□ -0.59
CHD3-216ENST00000573936 STIM2Q9P246 746 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 UVRAGQ9P2Y5 699 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 RAB23Q9ULC3 237 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 INTUQ9ULD6 942 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 USP18Q9UMW8 372 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 STARD13Q9Y3M8 1113 aa11.39□□□□□ -0.59
CHD3-216ENST00000573936 A0A1B0GVM2 712 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 TCAF2A6NFQ2 919 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 H0Y626 953 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 MYO1FO00160 1098 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 NPC1O15118 1278 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 CLDN11O75508 207 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 LUC7L3O95232 432 aaKnown RBP11.38□□□□□ -0.59
CHD3-216ENST00000573936 MOCS3O95396 460 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 TMEM253P0C7T8 217 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 CXCL12P48061 93 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 SGSHP51688 502 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 CDH4P55283 916 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 SEC13P55735 322 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 HDAC4P56524 1084 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 RPS24P62847 133 aaKnown RBP11.38□□□□□ -0.59
CHD3-216ENST00000573936 NRG1Q02297 640 aaPredicted RBP11.38□□□□□ -0.59
CHD3-216ENST00000573936 MTAPQ13126 283 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 SLC12A1Q13621 1099 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 CDH18Q13634 790 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 EIF4HQ15056 248 aaKnown RBP11.38□□□□□ -0.59
CHD3-216ENST00000573936 C5orf22Q49AR2 442 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 SH3PXD2AQ5TCZ1 1133 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 SCYL2Q6P3W7 929 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 AHI1Q8N157 1196 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 CARNMT1Q8N4J0 409 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.38□□□□□ -0.59
CHD3-216ENST00000573936 RPLP0P6Q8NHW5 317 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 USP33Q8TEY7 942 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 ANP32BQ92688 251 aaKnown RBP11.38□□□□□ -0.59
CHD3-216ENST00000573936 PDLIM2Q96JY6 352 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 NUP85Q9BW27 656 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 ZSCAN32Q9NX65 697 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 KIAA1522Q9P206 1035 aaPredicted RBP11.38□□□□□ -0.59
CHD3-216ENST00000573936 IP6K2Q9UHH9 426 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 GMEB2Q9UKD1 530 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 VANGL2Q9ULK5 521 aa11.38□□□□□ -0.59
CHD3-216ENST00000573936 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.37□□□□□ -0.59
CHD3-216ENST00000573936 DRGXA6NNA5 263 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 E9PAM4 449 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 TRIM24O15164 1050 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 PAPSS2O95340 614 aaPredicted RBP11.37□□□□□ -0.59
CHD3-216ENST00000573936 IPO7O95373 1038 aaKnown RBP11.37□□□□□ -0.59
CHD3-216ENST00000573936 PABPC1P11940 636 aaKnown RBP11.37□□□□□ -0.59
CHD3-216ENST00000573936 HNRNPLP14866 589 aaKnown RBP eCLIP11.37□□□□□ -0.59
CHD3-216ENST00000573936 FECHP22830 423 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 PCK1P35558 622 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 TIE1P35590 1138 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms