RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 SLC23A3Q6PIS1 610 aa13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 METTL3Q86U44 580 aaKnown RBP13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 CIR1Q86X95 450 aaPredicted RBP13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 AOPEPQ8N6M6 819 aa13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 CEP76Q8TAP6 659 aa13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 FOXJ1Q92949 421 aa13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 PCMTD1Q96MG8 357 aaPredicted RBP13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 STK33Q9BYT3 514 aa13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 FAM207AQ9NSI2 230 aaPredicted RBP13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 WSB2Q9NYS7 404 aaPredicted RBP13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 KIAA1522Q9P206 1035 aaPredicted RBP13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 USP36Q9P275 1121 aaKnown RBP13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 SLC6A14Q9UN76 642 aa13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 PLXND1Q9Y4D7 1925 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 F8VZ95 297 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 M0QYT0 321 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 CDX4O14627 284 aaPredicted RBP13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 TM4SF5O14894 197 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 GFPT2O94808 682 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 DNTTP04053 509 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 ADRB1P08588 477 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 SERPINF2P08697 491 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 MAOBP27338 520 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 OXTRP30559 389 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 NOS2P35228 1153 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 HOXD12P35452 270 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 COPB1P53618 953 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 POLR2FP61218 127 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 NCAPHQ15003 741 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 ANO6Q4KMQ2 910 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 PITRM1Q5JRX3 1037 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 WDR45BQ5MNZ6 344 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 RABGAP1LQ5R372 815 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 PEAR1Q5VY43 1037 aaPredicted RBP13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 RNF219Q5W0B1 726 aaPredicted RBP13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 PSAPL1Q6NUJ1 521 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 SLC26A9Q7LBE3 791 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 RABEPKQ7Z6M1 372 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 NOP9Q86U38 636 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 ERICH1Q86X53 443 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 ZDHHC17Q8IUH5 632 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 ANKRD20A12PQ8NF67 263 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 ZNF419Q96HQ0 510 aaPredicted RBP13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 RPRD1AQ96P16 312 aaPredicted RBP13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 NUP58Q9BVL2 599 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 NAA15Q9BXJ9 866 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 MIR1-1HGQ9H1L0 117 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 MTG2Q9H4K7 406 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 PRSS16Q9NQE7 514 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 SUN2Q9UH99 717 aa13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 INTS6Q9UL03 887 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-213ENST00000573519 CEP250Q9BV73 2442 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 ABCA7Q8IZY2 2146 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 TNRC6BQ9UPQ9 1833 aaKnown RBP13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 GOLGA8SH3BPF8 625 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 KCNK5O95279 499 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 ASLP04424 464 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 MMEP08473 750 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 GNSP15586 552 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 PDGFRAP16234 1089 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 CDK11BP21127 795 aaKnown RBP13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 GGCXP38435 758 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 MATKP42679 507 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 CTSOP43234 321 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 SULT1E1P49888 294 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 NOVA1P51513 510 aaKnown RBP13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 EIF4EBP2Q13542 120 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 PLEKHG6Q3KR16 790 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 C2CD6Q53TS8 623 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 FAM102AQ5T9C2 384 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 TTC39BQ5VTQ0 682 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 DCAF12L1Q5VU92 463 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 SND1Q7KZF4 910 aaKnown RBP eCLIP13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 DHX40Q8IX18 779 aaKnown RBP13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 APCDD1Q8J025 514 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 CCAR2Q8N163 923 aaKnown RBP13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 MSANTD4Q8NCY6 345 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 GANCQ8TET4 914 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 CPA5Q8WXQ8 436 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 SNX19Q92543 992 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 TTC17Q96AE7 1141 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 C18orf8Q96DM3 657 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 LMLNQ96KR4 655 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 SIK2Q9H0K1 926 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 GANQ9H2C0 597 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 HSD3B7Q9H2F3 369 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 NLRC4Q9NPP4 1024 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 SUSD2Q9UGT4 822 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 VANGL2Q9ULK5 521 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 STAP1Q9ULZ2 295 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 ERVW-1Q9UQF0 538 aa13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 MUC22E2RYF6 1773 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-213ENST00000573519 EPHB6O15197 1021 aa13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 LSM8O95777 96 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 ATP1A3P13637 1013 aa13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 ZNF18P17022 549 aa13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 CDH5P33151 784 aaPredicted RBP13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 RPS14P62263 151 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 CENPCQ03188 943 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms