RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 PPARGC1AQ9UBK2 798 aaKnown RBP17.82■□□□□ 0.44
LITAF-212ENST00000573332 OR12D3Q9UGF7 316 aa17.82■□□□□ 0.44
LITAF-212ENST00000573332 FZD10Q9ULW2 581 aa17.82■□□□□ 0.44
LITAF-212ENST00000573332 E9PAM4 449 aa17.81■□□□□ 0.44
LITAF-212ENST00000573332 CLDN11O75508 207 aa17.81■□□□□ 0.44
LITAF-212ENST00000573332 HLA-FP30511 346 aa17.81■□□□□ 0.44
LITAF-212ENST00000573332 KIR2DL1P43626 348 aaPredicted RBP17.81■□□□□ 0.44
LITAF-212ENST00000573332 CDH4P55283 916 aa17.81■□□□□ 0.44
LITAF-212ENST00000573332 MRPS21P82921 87 aaKnown RBP17.81■□□□□ 0.44
LITAF-212ENST00000573332 GAS6Q14393 721 aa17.81■□□□□ 0.44
LITAF-212ENST00000573332 HSF5Q4G112 596 aaPredicted RBP17.81■□□□□ 0.44
LITAF-212ENST00000573332 PSTKQ8IV42 348 aaKnown RBP17.81■□□□□ 0.44
LITAF-212ENST00000573332 MFN1Q8IWA4 741 aa17.81■□□□□ 0.44
LITAF-212ENST00000573332 CCDC117Q8IWD4 279 aaPredicted RBP17.81■□□□□ 0.44
LITAF-212ENST00000573332 CCAR2Q8N163 923 aaKnown RBP17.81■□□□□ 0.44
LITAF-212ENST00000573332 SPEM1Q8N4L4 309 aa17.81■□□□□ 0.44
LITAF-212ENST00000573332 DTWD2Q8NBA8 298 aa17.81■□□□□ 0.44
LITAF-212ENST00000573332 SLC35G2Q8TBE7 412 aa17.81■□□□□ 0.44
LITAF-212ENST00000573332 WFIKKN2Q8TEU8 576 aa17.81■□□□□ 0.44
LITAF-212ENST00000573332 STIM2Q9P246 746 aa17.81■□□□□ 0.44
LITAF-212ENST00000573332 PCDHA13Q9Y5I0 950 aa17.81■□□□□ 0.44
LITAF-212ENST00000573332 PRRT4C9JH25 899 aa17.8■□□□□ 0.44
LITAF-212ENST00000573332 TIMM44O43615 452 aa17.8■□□□□ 0.44
LITAF-212ENST00000573332 ATG13O75143 517 aa17.8■□□□□ 0.44
LITAF-212ENST00000573332 RNF40O75150 1001 aa17.8■□□□□ 0.44
LITAF-212ENST00000573332 IPO7O95373 1038 aaKnown RBP17.8■□□□□ 0.44
LITAF-212ENST00000573332 MIPP30301 263 aa17.8■□□□□ 0.44
LITAF-212ENST00000573332 L1CAMP32004 1257 aa17.8■□□□□ 0.44
LITAF-212ENST00000573332 GGCXP38435 758 aa17.8■□□□□ 0.44
LITAF-212ENST00000573332 HADHBP55084 474 aaKnown RBP17.8■□□□□ 0.44
LITAF-212ENST00000573332 OXCT1P55809 520 aa17.8■□□□□ 0.44
LITAF-212ENST00000573332 SLC12A1Q13621 1099 aa17.8■□□□□ 0.44
LITAF-212ENST00000573332 EIF4HQ15056 248 aaKnown RBP17.8■□□□□ 0.44
LITAF-212ENST00000573332 GEN1Q17RS7 908 aa17.8■□□□□ 0.44
LITAF-212ENST00000573332 EFHC2Q5JST6 749 aa17.8■□□□□ 0.44
LITAF-212ENST00000573332 CYP4V2Q6ZWL3 525 aaPredicted RBP17.8■□□□□ 0.44
LITAF-212ENST00000573332 ANKS1BQ7Z6G8 1248 aa17.8■□□□□ 0.44
LITAF-212ENST00000573332 SFTPA1Q8IWL2 248 aa17.8■□□□□ 0.44
LITAF-212ENST00000573332 WFDC5Q8TCV5 224 aa17.8■□□□□ 0.44
LITAF-212ENST00000573332 USP33Q8TEY7 942 aa17.8■□□□□ 0.44
LITAF-212ENST00000573332 OSGEPQ9NPF4 335 aa17.8■□□□□ 0.44
LITAF-212ENST00000573332 USP18Q9UMW8 372 aa17.8■□□□□ 0.44
LITAF-212ENST00000573332 TBC1D30Q9Y2I9 924 aa17.8■□□□□ 0.44
LITAF-212ENST00000573332 SNX10Q9Y5X0 201 aa17.8■□□□□ 0.44
LITAF-212ENST00000573332 A0A0A6YYK5 440 aaPredicted RBP17.79■□□□□ 0.44
LITAF-212ENST00000573332 H0Y626 953 aa17.79■□□□□ 0.44
LITAF-212ENST00000573332 PRPSAP2O60256 369 aa17.79■□□□□ 0.44
LITAF-212ENST00000573332 PROSCO94903 275 aa17.79■□□□□ 0.44
LITAF-212ENST00000573332 PABPC1P11940 636 aaKnown RBP17.79■□□□□ 0.44
LITAF-212ENST00000573332 ARHGAP25P42331 645 aa17.79■□□□□ 0.44
LITAF-212ENST00000573332 IRAK1P51617 712 aa17.79■□□□□ 0.44
LITAF-212ENST00000573332 MTAPQ13126 283 aa17.79■□□□□ 0.44
LITAF-212ENST00000573332 SEMA3BQ13214 749 aa17.79■□□□□ 0.44
LITAF-212ENST00000573332 CDH18Q13634 790 aa17.79■□□□□ 0.44
LITAF-212ENST00000573332 DMC1Q14565 340 aa17.79■□□□□ 0.44
LITAF-212ENST00000573332 E2F5Q15329 346 aa17.79■□□□□ 0.44
LITAF-212ENST00000573332 BOLA3Q53S33 107 aa17.79■□□□□ 0.44
LITAF-212ENST00000573332 ERMARDQ5T6L9 678 aa17.79■□□□□ 0.44
LITAF-212ENST00000573332 Q6ZS52 159 aa17.79■□□□□ 0.44
LITAF-212ENST00000573332 AHI1Q8N157 1196 aa17.79■□□□□ 0.44
LITAF-212ENST00000573332 CARNMT1Q8N4J0 409 aa17.79■□□□□ 0.44
LITAF-212ENST00000573332 BTBD6Q96KE9 485 aa17.79■□□□□ 0.44
LITAF-212ENST00000573332 PEBP4Q96S96 227 aa17.79■□□□□ 0.44
LITAF-212ENST00000573332 ZYG11BQ9C0D3 744 aa17.79■□□□□ 0.44
LITAF-212ENST00000573332 ABCB8Q9NUT2 735 aa17.79■□□□□ 0.44
LITAF-212ENST00000573332 KIAA1522Q9P206 1035 aaPredicted RBP17.79■□□□□ 0.44
LITAF-212ENST00000573332 GGA2Q9UJY4 613 aa17.79■□□□□ 0.44
LITAF-212ENST00000573332 MYOFQ9NZM1 2061 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 KIAA1549LQ6ZVL6 1849 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.78■□□□□ 0.44
LITAF-212ENST00000573332 FAM72CH0Y354 149 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 NPC1O15118 1278 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 SRGAP2O75044 1071 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 CNTN5O94779 1100 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 LRIG2O94898 1065 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 PAPSS2O95340 614 aaPredicted RBP17.78■□□□□ 0.44
LITAF-212ENST00000573332 HNRNPLP14866 589 aaKnown RBP eCLIP17.78■□□□□ 0.44
LITAF-212ENST00000573332 HOXC13P31276 330 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 CD70P32970 193 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 MAN1A1P33908 653 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 HTR7P34969 479 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 ZNF135P52742 658 aaPredicted RBP17.78■□□□□ 0.44
LITAF-212ENST00000573332 PLK1P53350 603 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 KRT83P78385 493 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 LMAN2Q12907 356 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 ZNF177Q13360 481 aaPredicted RBP17.78■□□□□ 0.44
LITAF-212ENST00000573332 ALFQ53S48 1182 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 FSCBQ5H9T9 825 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 FAM72AQ5TYM5 149 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 TMEM215Q68D42 235 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 FAM72DQ6L9T8 149 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 CXorf57Q6NSI4 855 aaKnown RBP17.78■□□□□ 0.44
LITAF-212ENST00000573332 SETD3Q86TU7 594 aaPredicted RBP17.78■□□□□ 0.44
LITAF-212ENST00000573332 ADIPOR2Q86V24 386 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 FAM72BQ86X60 149 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 C1orf210Q8IVY1 113 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 CCDC112Q8NEF3 446 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 PPP1R9BQ96SB3 815 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 PRRX2Q99811 253 aa17.78■□□□□ 0.44
LITAF-212ENST00000573332 SNRNP25Q9BV90 132 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms