RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 ZNF564Q8TBZ8 553 aaPredicted RBP12.3□□□□□ -0.44
NDE1-206ENST00000572967 FNIP1Q8TF40 1166 aa12.3□□□□□ -0.44
NDE1-206ENST00000572967 RNF139Q8WU17 664 aa12.3□□□□□ -0.44
NDE1-206ENST00000572967 RLN3Q8WXF3 142 aa12.3□□□□□ -0.44
NDE1-206ENST00000572967 NDRG1Q92597 394 aaKnown RBP12.3□□□□□ -0.44
NDE1-206ENST00000572967 LOXL4Q96JB6 756 aa12.3□□□□□ -0.44
NDE1-206ENST00000572967 SPACA7Q96KW9 195 aa12.3□□□□□ -0.44
NDE1-206ENST00000572967 ZNF830Q96NB3 372 aaPredicted RBP12.3□□□□□ -0.44
NDE1-206ENST00000572967 NUP85Q9BW27 656 aa12.3□□□□□ -0.44
NDE1-206ENST00000572967 THAP2Q9H0W7 228 aa12.3□□□□□ -0.44
NDE1-206ENST00000572967 POPDC2Q9HBU9 364 aa12.3□□□□□ -0.44
NDE1-206ENST00000572967 CLIC5Q9NZA1 410 aa12.3□□□□□ -0.44
NDE1-206ENST00000572967 DEC1Q9P2X7 70 aa12.3□□□□□ -0.44
NDE1-206ENST00000572967 MYO1AQ9UBC5 1043 aa12.3□□□□□ -0.44
NDE1-206ENST00000572967 CYTH4Q9UIA0 394 aa12.3□□□□□ -0.44
NDE1-206ENST00000572967 ZKSCAN5Q9Y2L8 839 aa12.3□□□□□ -0.44
NDE1-206ENST00000572967 PAXBP1Q9Y5B6 917 aa12.3□□□□□ -0.44
NDE1-206ENST00000572967 ATXN2Q99700 1313 aaKnown RBP12.3□□□□□ -0.44
NDE1-206ENST00000572967 ABCA7Q8IZY2 2146 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 CEP250Q9BV73 2442 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 SIGLEC16A6NMB1 481 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 MYO1FO00160 1098 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 SLC30A4O14863 429 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 MTA2O94776 668 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 ALDH1A2O94788 518 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 RHOBTB1O94844 696 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 LTFP02788 710 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 SDC4P31431 198 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 NOP2P46087 812 aaKnown RBP12.29□□□□□ -0.44
NDE1-206ENST00000572967 HADHBP55084 474 aaKnown RBP12.29□□□□□ -0.44
NDE1-206ENST00000572967 YWHAGP61981 247 aaKnown RBP eCLIP12.29□□□□□ -0.44
NDE1-206ENST00000572967 YWHAZP63104 245 aaKnown RBP12.29□□□□□ -0.44
NDE1-206ENST00000572967 PTP4A2Q12974 167 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 MTA1Q13330 715 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 HSF5Q4G112 596 aaPredicted RBP12.29□□□□□ -0.44
NDE1-206ENST00000572967 USP39Q53GS9 565 aaKnown RBP12.29□□□□□ -0.44
NDE1-206ENST00000572967 KLHDC10Q6PID8 442 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 CYP2U1Q7Z449 544 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 SCUBE3Q8IX30 993 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 SYCE1Q8N0S2 351 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 PGBD3Q8N328 593 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 P2RY11Q96G91 374 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 ZC3H10Q96K80 434 aaKnown RBP12.29□□□□□ -0.44
NDE1-206ENST00000572967 XPO6Q96QU8 1125 aaKnown RBP12.29□□□□□ -0.44
NDE1-206ENST00000572967 EDEM2Q9BV94 578 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 POLMQ9NP87 494 aaPredicted RBP12.29□□□□□ -0.44
NDE1-206ENST00000572967 METTL5Q9NRN9 209 aaKnown RBP12.29□□□□□ -0.44
NDE1-206ENST00000572967 ABCC13Q9NSE7 274 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 MARK1Q9P0L2 795 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 IP6K2Q9UHH9 426 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 PCDHGA5Q9Y5G8 931 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 ZNF292O60281 2723 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 ADAMTS9Q9P2N4 1935 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 SDK1Q7Z5N4 2213 aa12.29□□□□□ -0.44
NDE1-206ENST00000572967 SLC12A8A0AV02 714 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 PIK3R2O00459 728 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 KIF5CO60282 957 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 ZNF806P0C7X5 589 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 ARHGAP25P42331 645 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 TNFRSF4P43489 277 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 DHPSP49366 369 aaPredicted RBP12.28□□□□□ -0.44
NDE1-206ENST00000572967 DGKGP49619 791 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 MAMLD1Q13495 774 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 ACAP1Q15027 740 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 PREPLQ4J6C6 727 aaPredicted RBP12.28□□□□□ -0.44
NDE1-206ENST00000572967 PPM1JQ5JR12 505 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 PLA2G2CQ5R387 149 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 SND1Q7KZF4 910 aaKnown RBP eCLIP12.28□□□□□ -0.44
NDE1-206ENST00000572967 BHLHA9Q7RTU4 235 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 TRMT11Q7Z4G4 463 aaKnown RBP12.28□□□□□ -0.44
NDE1-206ENST00000572967 FRMD1Q8N878 549 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 MCEEQ96PE7 176 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 ACOX2Q99424 681 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 PACSIN1Q9BY11 444 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 KCND1Q9NSA2 647 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.28□□□□□ -0.44
NDE1-206ENST00000572967 MARCH2Q9P0N8 246 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 ANAPC7Q9UJX3 599 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 HCN2Q9UL51 889 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 REXO2Q9Y3B8 237 aaKnown RBP12.28□□□□□ -0.44
NDE1-206ENST00000572967 RAD54BQ9Y620 910 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 CKAP5Q14008 2032 aa12.28□□□□□ -0.44
NDE1-206ENST00000572967 BCLAF3A2AJT9 711 aaKnown RBP12.27□□□□□ -0.45
NDE1-206ENST00000572967 PRRT4C9JH25 899 aa12.27□□□□□ -0.45
NDE1-206ENST00000572967 ATMINO43313 823 aaPredicted RBP12.27□□□□□ -0.45
NDE1-206ENST00000572967 MSI1O43347 362 aaKnown RBP12.27□□□□□ -0.45
NDE1-206ENST00000572967 RNF8O76064 485 aa12.27□□□□□ -0.45
NDE1-206ENST00000572967 F9P00740 461 aa12.27□□□□□ -0.45
NDE1-206ENST00000572967 KLKB1P03952 638 aa12.27□□□□□ -0.45
NDE1-206ENST00000572967 GPD1P21695 349 aa12.27□□□□□ -0.45
NDE1-206ENST00000572967 MAN1A1P33908 653 aa12.27□□□□□ -0.45
NDE1-206ENST00000572967 NOS2P35228 1153 aa12.27□□□□□ -0.45
NDE1-206ENST00000572967 P2RY2P41231 377 aa12.27□□□□□ -0.45
NDE1-206ENST00000572967 MATKP42679 507 aa12.27□□□□□ -0.45
NDE1-206ENST00000572967 SLC1A1P43005 524 aa12.27□□□□□ -0.45
NDE1-206ENST00000572967 PTPN9P43378 593 aa12.27□□□□□ -0.45
NDE1-206ENST00000572967 PIGHQ14442 188 aaPredicted RBP12.27□□□□□ -0.45
NDE1-206ENST00000572967 BSPRYQ5W0U4 402 aa12.27□□□□□ -0.45
NDE1-206ENST00000572967 IL31Q6EBC2 164 aa12.27□□□□□ -0.45
NDE1-206ENST00000572967 ZSCAN30Q86W11 494 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms