RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 PTPRNQ16849 979 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 MPEG1Q2M385 716 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 TRIM71Q2Q1W2 868 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 SV2CQ496J9 727 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 Q4G0T1 1027 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 NOL9Q5SY16 702 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 RBM20Q5T481 1227 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 ZNF658Q5TYW1 1059 aaPredicted RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 SNX30Q5VWJ9 437 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 MAP1SQ66K74 1059 aaPredicted RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 OLFML2BQ68BL8 750 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 SNRNP48Q6IEG0 339 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 SLC25A24Q6NUK1 477 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 KIAA1211LQ6NV74 962 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 ARMCX5Q6P1M9 558 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 TAF2Q6P1X5 1199 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 ERICH5Q6P6B1 374 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 AAGABQ6PD74 315 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 SLC30A9Q6PML9 568 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 SLC2A7Q6PXP3 512 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 NPNTQ6UXI9 565 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 LRIG3Q6UXM1 1119 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 NSMFQ6X4W1 530 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 GADL1Q6ZQY3 521 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 CATSPERGQ6ZRH7 1159 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 RHOUQ7L0Q8 258 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 APTXQ7Z2E3 356 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 THAP5Q7Z6K1 395 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 CAND1Q86VP6 1230 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 CATSPER3Q86XQ3 398 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 SLC9A9Q8IVB4 645 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 CD302Q8IX05 232 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 MCEMP1Q8IX19 187 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 SMYD1Q8NB12 490 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 CLRN3Q8NCR9 226 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 SMC1BQ8NDV3 1235 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 SPPL3Q8TCT6 385 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 BCAS4Q8TDM0 211 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 SYTL5Q8TDW5 730 aaPredicted RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 NELFBQ8WX92 580 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 SEPT1Q8WYJ6 367 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 ST8SIA4Q92187 359 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 LARP4BQ92615 738 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 TTC9Q92623 222 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 LPAR1Q92633 364 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 PPP1R14AQ96A00 147 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 FAM162AQ96A26 154 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 DCPSQ96C86 337 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 DNAJC19Q96DA6 116 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 IFT43Q96FT9 208 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 THOC1Q96FV9 657 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 EEF2KMTQ96G04 330 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 MSANTD3Q96H12 275 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 DYDC2Q96IM9 177 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 C7orf34Q96L11 122 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 C12orf42Q96LP6 360 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 CMTM3Q96MX0 182 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 TRERF1Q96PN7 1200 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 PDCD2LQ9BRP1 358 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 THUMPD3Q9BV44 507 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 TRIM9Q9C026 710 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 CEP44Q9C0F1 390 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 MTMR12Q9C0I1 747 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 CARD9Q9H257 536 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 TAF1DQ9H5J8 278 aaPredicted RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 SH2D4AQ9H788 454 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 ERVK-5Q9HDB9 667 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 SLC39A2Q9NP94 309 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 EMC7Q9NPA0 242 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 PICK1Q9NRD5 415 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 SLC35D1Q9NTN3 355 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 RNF146Q9NTX7 359 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 SPATS2LQ9NUQ6 558 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 TAB2Q9NYJ8 693 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 RGL1Q9NZL6 768 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 BTBD7Q9P203 1132 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 ANAPC5Q9UJX4 755 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 ZNF214Q9UL59 606 aaPredicted RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 PCDHA12Q9UN75 941 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 KLHL20Q9Y2M5 609 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 NFE2L3Q9Y4A8 694 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 ASB3Q9Y575 518 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 SCN1AP35498 2009 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 ASTN1O14525 1302 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 UTRNP46939 3433 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 CASP8AP2Q9UKL3 1982 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 OR6C74A6NCV1 312 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 POM121BA6NF01 834 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 GLTPD2A6NH11 291 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 USP27XA6NNY8 438 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 RNF225M0QZC1 329 aaPredicted RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 O00370 1275 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 DDX3XO00571 662 aaKnown RBP eCLIP3.67□□□□□ -1.82
SMG6-208ENST00000570874 APOL1O14791 398 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 ADAM23O75077 832 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 ATP9AO75110 1047 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 NIPSNAP2O75323 286 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 CNMDO75829 334 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 PSMD10O75832 226 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 GGPS1O95749 300 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms