RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 FSBPO95073 299 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 SEMA4FO95754 770 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 IGLV3-19P01714 112 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 TPM2P07951 284 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 SRPRAP08240 638 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 TACR2P21452 398 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 ERCC5P28715 1186 aaPredicted RBP9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 CCR1P32246 355 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 CSKP41240 450 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 OXCT1P55809 520 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 RPS14P62263 151 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 APBA1Q02410 837 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 SEMA3BQ13214 749 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 NME3Q13232 169 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 MTA1Q13330 715 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 SLC14A1Q13336 389 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 RAPGEF1Q13905 1077 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 TEAD4Q15561 434 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 PTPRNQ16849 979 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 VWA3BQ502W6 1294 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 HSP90AA4PQ58FG1 418 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 PITRM1Q5JRX3 1037 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 IL27RAQ6UWB1 636 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 C11orf57Q6ZUT1 292 aaPredicted RBP9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 SND1Q7KZF4 910 aaKnown RBP eCLIP9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 DHX40Q8IX18 779 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 C1orf131Q8NDD1 294 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 WFDC5Q8TCV5 224 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 SETD7Q8WTS6 366 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 DNASE2BQ8WZ79 361 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 SHC3Q92529 594 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 TTC17Q96AE7 1141 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 PRICKLE1Q96MT3 831 aaPredicted RBP9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 OMDQ99983 421 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 TUBGCP2Q9BSJ2 902 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 NDST4Q9H3R1 872 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 SGK2Q9HBY8 427 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 CYTH4Q9UIA0 394 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 SCML1Q9UN30 329 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 PCDHGC3Q9UN70 934 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 SPTBN2O15020 2390 aa9.24□□□□□ -0.93
NPLOC4-204ENST00000570324 GON4LQ3T8J9 2241 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 NCOR2Q9Y618 2525 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 CKAP5Q14008 2032 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 EDDM13A0A1B0GTR0 161 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 SPAARA0A1B0GVQ0 90 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 TARSL2A2RTX5 802 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 FAM47DPA6NHR8 397 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 UPK3BL1B0FP48 263 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 UPK3BL2E5RIL1 263 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 FOXN3O00409 490 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 SIN3BO75182 1162 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 CER1O95813 267 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 ACSL1P33121 698 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 MATKP42679 507 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 AFF3P51826 1226 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 ECT2LQ008S8 904 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 SULT2A1Q06520 285 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 GRIK2Q13002 908 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 SLC12A1Q13621 1099 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 TAF5Q15542 800 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 HNRNPA1L2Q32P51 320 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 FSCBQ5H9T9 825 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 TTC39BQ5VTQ0 682 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 SMYD5Q6GMV2 418 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 MMS22LQ6ZRQ5 1243 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 FAM183BPQ6ZVS7 135 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 ADAT2Q7Z6V5 191 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 IRF2BP1Q8IU81 584 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 CCAR2Q8N163 923 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 KDM1BQ8NB78 822 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 TMEM35BQ8NCS4 154 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 MSANTD4Q8NCY6 345 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 RPRD1AQ96P16 312 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 CPXM1Q96SM3 734 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 MTG2Q9H4K7 406 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 C6orf106Q9H6K1 298 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 GAREM1Q9H706 876 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 DNAAF2Q9NVR5 837 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 ASNSD1Q9NWL6 643 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 FBXL12Q9NXK8 326 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 XPO7Q9UIA9 1087 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 STAP1Q9ULZ2 295 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 ERVW-1Q9UQF0 538 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 DMXL1Q9Y485 3027 aa9.23□□□□□ -0.93
NPLOC4-204ENST00000570324 WDR87Q6ZQQ6 2873 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 A0A1B0GVM2 712 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 TCAF2A6NFQ2 919 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 LRRC72A6NJI9 287 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 TTC34A8MYJ7 566 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 M0QYT0 321 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 SH3BP5O60239 455 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 RNASEH2AO75792 299 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 TRIM16O95361 564 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 ZNF18P17022 549 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 SPINK2P20155 84 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 NOS2P35228 1153 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 CSNK1EP49674 416 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 RNASE9P60153 205 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms