RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 LMLNQ96KR4 655 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 UBXN10Q96LJ8 280 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 ZSCAN31Q96LW9 406 aaPredicted RBP5.31□□□□□ -1.56
CHD9-220ENST00000569794 BARD1Q99728 777 aaKnown RBP5.31□□□□□ -1.56
CHD9-220ENST00000569794 UNC45AQ9H3U1 944 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 VPS45Q9NRW7 570 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 TBC1D22BQ9NU19 505 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 IFT80Q9P2H3 777 aaPredicted RBP5.31□□□□□ -1.56
CHD9-220ENST00000569794 PDP2Q9P2J9 529 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 TTLL3Q9Y4R7 772 aa5.31□□□□□ -1.56
CHD9-220ENST00000569794 TCF20Q9UGU0 1960 aaKnown RBP5.3□□□□□ -1.56
CHD9-220ENST00000569794 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.3□□□□□ -1.56
CHD9-220ENST00000569794 MBD3L4A6NDZ8 208 aaPredicted RBP5.3□□□□□ -1.56
CHD9-220ENST00000569794 MBD3L3A6NE82 208 aaPredicted RBP5.3□□□□□ -1.56
CHD9-220ENST00000569794 C16orf96A6NNT2 1141 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 F8W810 466 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 EIF3FO00303 357 aaPredicted RBP5.3□□□□□ -1.56
CHD9-220ENST00000569794 PHGDHO43175 533 aaKnown RBP5.3□□□□□ -1.56
CHD9-220ENST00000569794 NCK2O43639 380 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 USP12O75317 370 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 PIAS2O75928 621 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 RPS6KB1P23443 525 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 TECP42680 631 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 POLD2P49005 469 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 JAK3P52333 1124 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 SLC12A2P55011 1212 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 TAF11Q15544 211 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 CDC37Q16543 378 aaPredicted RBP5.3□□□□□ -1.56
CHD9-220ENST00000569794 ODF3L2Q3SX64 289 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 C9orf50Q5SZB4 431 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 IZUMO3Q5VZ72 239 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 USP49Q70CQ1 688 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 TMEM199Q8N511 208 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 LRTOMTQ8WZ04 291 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 PIGKQ92643 395 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 MIB2Q96AX9 1013 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 P2RY11Q96G91 374 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 VPS50Q96JG6 964 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 NUDT16L1Q9BRJ7 211 aaKnown RBP5.3□□□□□ -1.56
CHD9-220ENST00000569794 ATP6V0A4Q9HBG4 840 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 SH3GLB2Q9NR46 395 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 HELLSQ9NRZ9 838 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 STEAP1Q9UHE8 339 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 PCDHGB2Q9Y5G2 931 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 SNX13Q9Y5W8 968 aa5.3□□□□□ -1.56
CHD9-220ENST00000569794 TRBV5-3A0A0A0MS03 114 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 A0A0G2JK05 382 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 A0A1W2PPC1 479 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 FAM170AA1A519 330 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 CAPN8A6NHC0 703 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 PYCARD-AS1I3L0S3 204 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 EYA2O00167 538 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 TIPRLO75663 272 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 CSTBP04080 98 aaKnown RBP5.29□□□□□ -1.56
CHD9-220ENST00000569794 ELF1P32519 619 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 STT3AP46977 705 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 ARHGEF7Q14155 803 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 STARD3Q14849 445 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 CNN3Q15417 329 aaKnown RBP5.29□□□□□ -1.56
CHD9-220ENST00000569794 FAM209BQ5JX69 171 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 PGBD2Q6P3X8 592 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 NPNTQ6UXI9 565 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 RBM44Q6ZP01 1051 aaKnown RBP5.29□□□□□ -1.56
CHD9-220ENST00000569794 KIAA0319LQ8IZA0 1049 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 FBXL14Q8N1E6 418 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 IL31RAQ8NI17 732 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 DNASE2BQ8WZ79 361 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 NR4A3Q92570 626 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 USP13Q92995 863 aaPredicted RBP5.29□□□□□ -1.56
CHD9-220ENST00000569794 ATP2A3Q93084 1043 aa5.29□□□□□ -1.56
CHD9-220ENST00000569794 NTPCRQ9BSD7 190 aaKnown RBP5.29□□□□□ -1.56
CHD9-220ENST00000569794 DHX36Q9H2U1 1008 aaKnown RBP5.29□□□□□ -1.56
CHD9-220ENST00000569794 PRKRIP1Q9H875 184 aaPredicted RBP5.29□□□□□ -1.56
CHD9-220ENST00000569794 PAPOLBQ9NRJ5 636 aaKnown RBP5.29□□□□□ -1.56
CHD9-220ENST00000569794 TRIM43BA6NCK2 446 aa5.28□□□□□ -1.56
CHD9-220ENST00000569794 TSPY2A6NKD2 308 aa5.28□□□□□ -1.56
CHD9-220ENST00000569794 ACOT8O14734 319 aa5.28□□□□□ -1.56
CHD9-220ENST00000569794 CA12O43570 354 aa5.28□□□□□ -1.56
CHD9-220ENST00000569794 ATG13O75143 517 aa5.28□□□□□ -1.56
CHD9-220ENST00000569794 ZC3H11AO75152 810 aaKnown RBP eCLIP5.28□□□□□ -1.56
CHD9-220ENST00000569794 GAS8-AS1O95177 125 aa5.28□□□□□ -1.56
CHD9-220ENST00000569794 MBPP02686 304 aaPredicted RBP5.28□□□□□ -1.56
CHD9-220ENST00000569794 DHRS4L1P0CG22 281 aa5.28□□□□□ -1.56
CHD9-220ENST00000569794 TSPY3P0CV98 308 aa5.28□□□□□ -1.56
CHD9-220ENST00000569794 TSPY8P0CW00 308 aa5.28□□□□□ -1.56
CHD9-220ENST00000569794 FGF3P11487 239 aaPredicted RBP5.28□□□□□ -1.56
CHD9-220ENST00000569794 KLRC1P26715 233 aa5.28□□□□□ -1.56
CHD9-220ENST00000569794 SLC7A1P30825 629 aa5.28□□□□□ -1.56
CHD9-220ENST00000569794 GALNSP34059 522 aa5.28□□□□□ -1.56
CHD9-220ENST00000569794 RAD52P43351 418 aa5.28□□□□□ -1.56
CHD9-220ENST00000569794 AGFG1P52594 562 aaKnown RBP5.28□□□□□ -1.56
CHD9-220ENST00000569794 EIF4A1P60842 406 aaKnown RBP5.28□□□□□ -1.56
CHD9-220ENST00000569794 WDR5P61964 334 aaKnown RBP5.28□□□□□ -1.56
CHD9-220ENST00000569794 TSPY1Q01534 308 aa5.28□□□□□ -1.56
CHD9-220ENST00000569794 CCDC15Q0P6D6 951 aa5.28□□□□□ -1.56
CHD9-220ENST00000569794 PTGR1Q14914 329 aa5.28□□□□□ -1.56
CHD9-220ENST00000569794 CCDC30Q5VVM6 783 aa5.28□□□□□ -1.56
CHD9-220ENST00000569794 KRTAP5-1Q6L8H4 278 aa5.28□□□□□ -1.56
CHD9-220ENST00000569794 FASTKD5Q7L8L6 764 aaKnown RBP5.28□□□□□ -1.56
CHD9-220ENST00000569794 SPATA2LQ8IUW3 424 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms