RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 CLEC4EQ9ULY5 219 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 TBC1D3DA0A087WVF3 549 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 TBC1D3IA0A087WXS9 549 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 TBC1D3EA0A087X179 549 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 TBC1D3KA0A087X1G2 549 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 TBC1D3FA6NER0 549 aaPredicted RBP6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 TBC1D3LB9A6J9 549 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 D6RAR5 112 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 MUSKO15146 869 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 NKX2-8O15522 239 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 TLR5O60602 858 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 RNASEH1O60930 286 aaKnown RBP6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 RNASEH2AO75792 299 aaKnown RBP6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 SORBS2O94875 1100 aaKnown RBP6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 TBC1D3HP0C7X1 549 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 MAPTP10636 758 aaKnown RBP6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 CD1EP15812 388 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 GOT1P17174 413 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 ITGA3P26006 1051 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 VARSP26640 1264 aaKnown RBP6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 RPIAP49247 311 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 CYP27A1Q02318 531 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 CDC20Q12834 499 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 IFRD2Q12894 506 aaPredicted RBP6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 MAPK7Q13164 816 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 DRAP1Q14919 205 aaPredicted RBP6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 CST6Q15828 149 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 CRTC2Q53ET0 693 aaPredicted RBP6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 ZRANB3Q5FWF4 1079 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 TMEM164Q5U3C3 297 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 TBC1D3GQ6DHY5 549 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 TBC1D3CQ6IPX1 549 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 PIK3AP1Q6ZUJ8 805 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 DPH6Q7L8W6 267 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 CHD1LQ86WJ1 897 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 NT5DC4Q86YG4 428 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 TBC1D3Q8IZP1 549 aaPredicted RBP6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 IL22RA1Q8N6P7 574 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 TMEM145Q8NBT3 493 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 OR14C36Q8NHC7 312 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 WFIKKN2Q8TEU8 576 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 JPH3Q8WXH2 748 aaPredicted RBP6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 KCNN1Q92952 543 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 CCDC3Q9BQI4 270 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 SYT15Q9BQS2 421 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 TMUB1Q9BVT8 246 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 BOCQ9BWV1 1114 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 FOXP3Q9BZS1 431 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 BHMT2Q9H2M3 363 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 CAAP1Q9H8G2 361 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 TMEM30AQ9NV96 361 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 CYTH4Q9UIA0 394 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 ZNF510Q9Y2H8 683 aa6.92□□□□□ -1.3
HERPUD1-217ENST00000569429 A0A0B4J269 797 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 HIP1RO75146 1068 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 DEXIO95424 95 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 DLDP09622 509 aaKnown RBP6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 GUCY2CP25092 1073 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 LMO2P25791 158 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 OAS2P29728 719 aaKnown RBP6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 SLC8A1P32418 973 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 ATP5C1P36542 298 aaKnown RBP6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 CACNA2D1P54289 1103 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 PSMC1P62191 440 aaKnown RBP6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 POU5F1Q01860 360 aaKnown RBP6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 ZFP36L1Q07352 338 aaKnown RBP6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 EHHADHQ08426 723 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 INPP5JQ15735 1006 aaPredicted RBP6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 SOWAHAQ2M3V2 549 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 DEFB109BQ30KR1 87 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 SETMARQ53H47 684 aaPredicted RBP6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 LIMS2Q7Z4I7 341 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 KIAA0907Q7Z7F0 614 aaPredicted RBP6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 TRIM69Q86WT6 500 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 SMC5Q8IY18 1101 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 TRIM22Q8IYM9 498 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 ZNF548Q8NEK5 533 aaPredicted RBP6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 MYCBPAPQ8TBZ2 947 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 PTPRN2Q92932 1015 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 GLMNQ92990 594 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 FAM131CQ96AQ9 280 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 GFM1Q96RP9 751 aaKnown RBP6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 CMKLR1Q99788 373 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 SRRTQ9BXP5 876 aaKnown RBP6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 LSG1Q9H089 658 aaKnown RBP6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 SYNDIG1Q9H7V2 258 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 COMMD8Q9NX08 183 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 RCAN3Q9UKA8 241 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 CA5BQ9Y2D0 317 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 KCTD3Q9Y597 815 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 KCNMB2Q9Y691 235 aa6.91□□□□□ -1.3
HERPUD1-217ENST00000569429 CCER2I3L3R5 266 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 DUX1O43812 170 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 SIN3BO75182 1162 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 STC2O76061 302 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 TBX18O95935 607 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 PIGRP01833 764 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 CYBBP04839 570 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 ATP5BP06576 529 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 PRKAR1AP10644 381 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms