RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 PRAMEF14Q5SWL7 426 aa16.11■□□□□ 0.17
NME3-211ENST00000568561 ISM2Q6H9L7 571 aa16.11■□□□□ 0.17
NME3-211ENST00000568561 TMPRSS7Q7RTY8 843 aa16.11■□□□□ 0.17
NME3-211ENST00000568561 ADAT2Q7Z6V5 191 aaKnown RBP16.11■□□□□ 0.17
NME3-211ENST00000568561 CFAP52Q8N1V2 620 aa16.11■□□□□ 0.17
NME3-211ENST00000568561 DQX1Q8TE96 717 aaKnown RBP16.11■□□□□ 0.17
NME3-211ENST00000568561 IRGQQ8WZA9 623 aa16.11■□□□□ 0.17
NME3-211ENST00000568561 IGSF8Q969P0 613 aa16.11■□□□□ 0.17
NME3-211ENST00000568561 CCDC34Q96HJ3 373 aa16.11■□□□□ 0.17
NME3-211ENST00000568561 FCRL2Q96LA5 508 aaPredicted RBP16.11■□□□□ 0.17
NME3-211ENST00000568561 MRGPRX3Q96LB0 322 aa16.11■□□□□ 0.17
NME3-211ENST00000568561 SLC6A18Q96N87 628 aa16.11■□□□□ 0.17
NME3-211ENST00000568561 RSPH9Q9H1X1 276 aaPredicted RBP16.11■□□□□ 0.17
NME3-211ENST00000568561 PABPC3Q9H361 631 aaKnown RBP16.11■□□□□ 0.17
NME3-211ENST00000568561 FBRSQ9HAH7 460 aa16.11■□□□□ 0.17
NME3-211ENST00000568561 SGK2Q9HBY8 427 aa16.11■□□□□ 0.17
NME3-211ENST00000568561 KIAA1257Q9ULG3 409 aa16.11■□□□□ 0.17
NME3-211ENST00000568561 ATP6V1DQ9Y5K8 247 aa16.11■□□□□ 0.17
NME3-211ENST00000568561 A0A1W2PP55 124 aa16.1■□□□□ 0.17
NME3-211ENST00000568561 MID1O15344 667 aa16.1■□□□□ 0.17
NME3-211ENST00000568561 DKK1O94907 266 aa16.1■□□□□ 0.17
NME3-211ENST00000568561 FYNP06241 537 aa16.1■□□□□ 0.17
NME3-211ENST00000568561 C7P10643 843 aa16.1■□□□□ 0.17
NME3-211ENST00000568561 ST8SIA6P61647 398 aa16.1■□□□□ 0.17
NME3-211ENST00000568561 LRRC63Q05C16 580 aa16.1■□□□□ 0.17
NME3-211ENST00000568561 SUZ12Q15022 739 aaKnown RBP16.1■□□□□ 0.17
NME3-211ENST00000568561 COBLL1Q53SF7 1204 aa16.1■□□□□ 0.17
NME3-211ENST00000568561 MPP7Q5T2T1 576 aa16.1■□□□□ 0.17
NME3-211ENST00000568561 KIAA0895LQ68EN5 471 aa16.1■□□□□ 0.17
NME3-211ENST00000568561 RRAGAQ7L523 313 aa16.1■□□□□ 0.17
NME3-211ENST00000568561 PDZD3Q86UT5 571 aa16.1■□□□□ 0.17
NME3-211ENST00000568561 ARHGEF19Q8IW93 802 aa16.1■□□□□ 0.17
NME3-211ENST00000568561 UNC45BQ8IWX7 931 aa16.1■□□□□ 0.17
NME3-211ENST00000568561 FIBINQ8TAL6 211 aa16.1■□□□□ 0.17
NME3-211ENST00000568561 HNRNPLLQ8WVV9 542 aaKnown RBP16.1■□□□□ 0.17
NME3-211ENST00000568561 GOLGA1Q92805 767 aa16.1■□□□□ 0.17
NME3-211ENST00000568561 OSGEPQ9NPF4 335 aa16.1■□□□□ 0.17
NME3-211ENST00000568561 FBXL12Q9NXK8 326 aa16.1■□□□□ 0.17
NME3-211ENST00000568561 SUN2Q9UH99 717 aa16.1■□□□□ 0.17
NME3-211ENST00000568561 XPO7Q9UIA9 1087 aaKnown RBP16.1■□□□□ 0.17
NME3-211ENST00000568561 NAALADL1Q9UQQ1 740 aa16.1■□□□□ 0.17
NME3-211ENST00000568561 DOCK9Q9BZ29 2069 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 TTC34A8MYJ7 566 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 CBX4O00257 560 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 IRAK2O43187 625 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 RNASEH2AO75792 299 aaKnown RBP16.09■□□□□ 0.17
NME3-211ENST00000568561 CD44P16070 742 aaKnown RBP16.09■□□□□ 0.17
NME3-211ENST00000568561 GRK6P43250 576 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 CLDN6P56747 220 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 CDH18Q13634 790 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 CST6Q15828 149 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 CNGA2Q16280 664 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 HNRNPA1L2Q32P51 320 aaKnown RBP16.09■□□□□ 0.17
NME3-211ENST00000568561 CCDC40Q4G0X9 1142 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 PITRM1Q5JRX3 1037 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 NCEH1Q6PIU2 408 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 DHRS13Q6UX07 377 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 TAC4Q86UU9 113 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 GATAD2AQ86YP4 633 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 MMAAQ8IVH4 418 aaKnown RBP16.09■□□□□ 0.17
NME3-211ENST00000568561 SMARCE1Q969G3 411 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 TTC17Q96AE7 1141 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 FAM149B1Q96BN6 582 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 GSDMAQ96QA5 445 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 EBF2Q9HAK2 575 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 ST7Q9NRC1 585 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 NCKAP1Q9Y2A7 1128 aa16.09■□□□□ 0.17
NME3-211ENST00000568561 TYW5A2RUC4 315 aaKnown RBP16.08■□□□□ 0.16
NME3-211ENST00000568561 WNT9AO14904 365 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 TNFSF14O43557 240 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 SMC2O95347 1197 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 WNT1P04628 370 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 PSMD8P48556 350 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 GALCP54803 685 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 C21orf59P57076 290 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 CYP4F3Q08477 520 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 KCNJ12Q14500 433 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 ACAP1Q15027 740 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 DCAF6Q58WW2 860 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 MS4A13Q5J8X5 152 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 C9orf64Q5T6V5 341 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 SYPL2Q5VXT5 272 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 RAP1GAP2Q684P5 730 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 USP30Q70CQ3 517 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 SCUBE3Q8IX30 993 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 LMO3Q8TAP4 145 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 SERPINB11Q96P15 392 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 ACE2Q9BYF1 805 aaPredicted RBP16.08■□□□□ 0.16
NME3-211ENST00000568561 NEUROG2Q9H2A3 272 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 FTSJ1Q9UET6 329 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 SLCO3A1Q9UIG8 710 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 ERVW-1Q9UQF0 538 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 CEP83Q9Y592 693 aa16.08■□□□□ 0.16
NME3-211ENST00000568561 COL5A1P20908 1838 aaPredicted RBP16.08■□□□□ 0.16
NME3-211ENST00000568561 KNTC1P50748 2209 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 A0A1W2PPC4 97 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 TRABD2BA6NFA1 517 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 PCDHGA12O60330 932 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 FBXO21O94952 628 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 LUC7L3O95232 432 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms