RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 DQX1Q8TE96 717 aaKnown RBP23.93■■□□□ 1.42
LINC00543-201ENST00000567234 APBB2Q92870 758 aa23.93■■□□□ 1.42
LINC00543-201ENST00000567234 TBC1D31Q96DN5 1066 aa23.93■■□□□ 1.42
LINC00543-201ENST00000567234 EPAS1Q99814 870 aa23.93■■□□□ 1.42
LINC00543-201ENST00000567234 OSBPL2Q9H1P3 480 aa23.93■■□□□ 1.42
LINC00543-201ENST00000567234 XAB2Q9HCS7 855 aaKnown RBP23.93■■□□□ 1.42
LINC00543-201ENST00000567234 KCNK9Q9NPC2 374 aa23.93■■□□□ 1.42
LINC00543-201ENST00000567234 PCDHB7Q9Y5E2 793 aa23.93■■□□□ 1.42
LINC00543-201ENST00000567234 VWA8A3KMH1 1905 aa23.92■■□□□ 1.42
LINC00543-201ENST00000567234 FAM72CH0Y354 149 aa23.92■■□□□ 1.42
LINC00543-201ENST00000567234 I6L893 689 aaPredicted RBP23.92■■□□□ 1.42
LINC00543-201ENST00000567234 GRIK1P39086 918 aa23.92■■□□□ 1.42
LINC00543-201ENST00000567234 SLC5A3P53794 718 aa23.92■■□□□ 1.42
LINC00543-201ENST00000567234 PPARDQ03181 441 aa23.92■■□□□ 1.42
LINC00543-201ENST00000567234 FAM72AQ5TYM5 149 aa23.92■■□□□ 1.42
LINC00543-201ENST00000567234 FAM72DQ6L9T8 149 aa23.92■■□□□ 1.42
LINC00543-201ENST00000567234 TAC4Q86UU9 113 aa23.92■■□□□ 1.42
LINC00543-201ENST00000567234 FAM72BQ86X60 149 aa23.92■■□□□ 1.42
LINC00543-201ENST00000567234 IGDCC3Q8IVU1 814 aa23.92■■□□□ 1.42
LINC00543-201ENST00000567234 ABI1Q8IZP0 508 aa23.92■■□□□ 1.42
LINC00543-201ENST00000567234 SEPT8Q92599 483 aa23.92■■□□□ 1.42
LINC00543-201ENST00000567234 RAB3IPQ96QF0 476 aaPredicted RBP23.92■■□□□ 1.42
LINC00543-201ENST00000567234 LGMNQ99538 433 aa23.92■■□□□ 1.42
LINC00543-201ENST00000567234 PRMT1Q99873 361 aaKnown RBP23.92■■□□□ 1.42
LINC00543-201ENST00000567234 TKTL2Q9H0I9 626 aa23.92■■□□□ 1.42
LINC00543-201ENST00000567234 EIF2B3Q9NR50 452 aaKnown RBP23.92■■□□□ 1.42
LINC00543-201ENST00000567234 TTC3P53804 2025 aa23.92■■□□□ 1.42
LINC00543-201ENST00000567234 MYO16Q9Y6X6 1858 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 PRPF4O43172 522 aaKnown RBP eCLIP23.91■■□□□ 1.42
LINC00543-201ENST00000567234 TADA2AO75478 443 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 GJA8P48165 433 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 YWHAGP61981 247 aaKnown RBP eCLIP23.91■■□□□ 1.42
LINC00543-201ENST00000567234 GPNMBQ14956 572 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 SLC39A12Q504Y0 691 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 BRMS1LQ5PSV4 323 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 FAXCQ5TGI0 409 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 SLC39A5Q6ZMH5 540 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 DBF4BQ8NFT6 615 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 SCAMP5Q8TAC9 235 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 P2RY11Q96G91 374 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 PRDM12Q9H4Q4 367 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 NKIRAS1Q9NYS0 192 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 DNAJB4Q9UDY4 337 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 TRDMT1O14717 391 aaKnown RBP23.91■■□□□ 1.42
LINC00543-201ENST00000567234 MLNP12872 115 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 KRT15P19012 456 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 STX2P32856 288 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 AP1B1Q10567 949 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 TBC1D1Q86TI0 1168 aaPredicted RBP23.91■■□□□ 1.42
LINC00543-201ENST00000567234 LRRN4Q8WUT4 740 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 GRAMD1AQ96CP6 724 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 PAFAH2Q99487 392 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 SSU72Q9NP77 194 aaKnown RBP23.91■■□□□ 1.42
LINC00543-201ENST00000567234 OR12D3Q9UGF7 316 aa23.91■■□□□ 1.42
LINC00543-201ENST00000567234 SMG5Q9UPR3 1016 aaKnown RBP23.91■■□□□ 1.42
LINC00543-201ENST00000567234 PLXNA3P51805 1871 aa23.9■■□□□ 1.42
LINC00543-201ENST00000567234 RNF103O00237 685 aa23.9■■□□□ 1.42
LINC00543-201ENST00000567234 HTR7P34969 479 aa23.9■■□□□ 1.42
LINC00543-201ENST00000567234 SERPINB6P35237 376 aa23.9■■□□□ 1.42
LINC00543-201ENST00000567234 MSH2P43246 934 aa23.9■■□□□ 1.42
LINC00543-201ENST00000567234 BTBD8Q5XKL5 378 aa23.9■■□□□ 1.42
LINC00543-201ENST00000567234 C8orf48Q96LL4 319 aa23.9■■□□□ 1.42
LINC00543-201ENST00000567234 ZNF570Q96NI8 536 aa23.9■■□□□ 1.42
LINC00543-201ENST00000567234 SMOC2Q9H3U7 446 aa23.9■■□□□ 1.42
LINC00543-201ENST00000567234 TRABDQ9H4I3 376 aa23.9■■□□□ 1.42
LINC00543-201ENST00000567234 ARHGEF38Q9NXL2 777 aa23.9■■□□□ 1.42
LINC00543-201ENST00000567234 ARL2BPQ9Y2Y0 163 aa23.9■■□□□ 1.42
LINC00543-201ENST00000567234 PRG3Q9Y2Y8 225 aaPredicted RBP23.9■■□□□ 1.42
LINC00543-201ENST00000567234 TCRBV9S1A1TA0A576 114 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 FAM47DPA6NHR8 397 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 IRAK2O43187 625 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 MTSS1O43312 755 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 HOXA2O43364 376 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 AVILO75366 819 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 CCNB1P14635 433 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 MX2P20592 715 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 MAGEA11P43364 429 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 MPP2Q14168 576 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 MRPL58Q14197 206 aaKnown RBP23.89■■□□□ 1.42
LINC00543-201ENST00000567234 PARP6Q2NL67 630 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 VARS2Q5ST30 1063 aaKnown RBP23.89■■□□□ 1.42
LINC00543-201ENST00000567234 ASRGL1Q7L266 308 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 AGGF1Q8N302 714 aaeCLIP23.89■■□□□ 1.42
LINC00543-201ENST00000567234 COLGALT1Q8NBJ5 622 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 DYDC1Q8WWB3 177 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 THOC1Q96FV9 657 aaKnown RBP23.89■■□□□ 1.42
LINC00543-201ENST00000567234 HAPLN3Q96S86 360 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 SMC6Q96SB8 1091 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 ECT2Q9H8V3 914 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 RXFP1Q9HBX9 757 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 SLC24A3Q9HC58 644 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 IGSF9Q9P2J2 1179 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 ADAM28Q9UKQ2 775 aa23.89■■□□□ 1.42
LINC00543-201ENST00000567234 OR6C75A6NL08 312 aa23.89■■□□□ 1.41
LINC00543-201ENST00000567234 FOXO6A8MYZ6 492 aa23.89■■□□□ 1.41
LINC00543-201ENST00000567234 AMHP03971 560 aa23.89■■□□□ 1.41
LINC00543-201ENST00000567234 TRIM60Q495X7 471 aa23.89■■□□□ 1.41
LINC00543-201ENST00000567234 ZNF534Q76KX8 674 aa23.89■■□□□ 1.41
LINC00543-201ENST00000567234 CCDC33Q8N5R6 958 aa23.89■■□□□ 1.41
LINC00543-201ENST00000567234 CCNYQ8ND76 341 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms