RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 ZCWPW2Q504Y3 356 aa16.09■□□□□ 0.17
PALB2-205ENST00000567003 SGO2Q562F6 1265 aa16.09■□□□□ 0.17
PALB2-205ENST00000567003 CBWD3Q5JTY5 395 aa16.09■□□□□ 0.17
PALB2-205ENST00000567003 CBWD5Q5RIA9 395 aa16.09■□□□□ 0.17
PALB2-205ENST00000567003 MMAAQ8IVH4 418 aaKnown RBP16.09■□□□□ 0.17
PALB2-205ENST00000567003 MFN1Q8IWA4 741 aa16.09■□□□□ 0.17
PALB2-205ENST00000567003 SMYD4Q8IYR2 804 aaPredicted RBP16.09■□□□□ 0.17
PALB2-205ENST00000567003 TTC39CQ8N584 583 aa16.09■□□□□ 0.17
PALB2-205ENST00000567003 EID2Q8N6I1 236 aa16.09■□□□□ 0.17
PALB2-205ENST00000567003 CLEC4CQ8WTT0 213 aa16.09■□□□□ 0.17
PALB2-205ENST00000567003 GOLGA1Q92805 767 aa16.09■□□□□ 0.17
PALB2-205ENST00000567003 NXPE2Q96DL1 559 aa16.09■□□□□ 0.17
PALB2-205ENST00000567003 MRGPRX3Q96LB0 322 aa16.09■□□□□ 0.17
PALB2-205ENST00000567003 UBL7Q96S82 380 aaPredicted RBP16.09■□□□□ 0.17
PALB2-205ENST00000567003 NEUROG2Q9H2A3 272 aa16.09■□□□□ 0.17
PALB2-205ENST00000567003 HPSEQ9Y251 543 aa16.09■□□□□ 0.17
PALB2-205ENST00000567003 NCKAP1Q9Y2A7 1128 aa16.09■□□□□ 0.17
PALB2-205ENST00000567003 TTC34A8MYJ7 566 aa16.08■□□□□ 0.16
PALB2-205ENST00000567003 RFPL3O75679 317 aa16.08■□□□□ 0.16
PALB2-205ENST00000567003 RNASEH2AO75792 299 aaKnown RBP16.08■□□□□ 0.16
PALB2-205ENST00000567003 LATS1O95835 1130 aa16.08■□□□□ 0.16
PALB2-205ENST00000567003 ITGAVP06756 1048 aa16.08■□□□□ 0.16
PALB2-205ENST00000567003 RPL13P26373 211 aaKnown RBP16.08■□□□□ 0.16
PALB2-205ENST00000567003 PSMD8P48556 350 aa16.08■□□□□ 0.16
PALB2-205ENST00000567003 ACADVLP49748 655 aa16.08■□□□□ 0.16
PALB2-205ENST00000567003 ZNF445P59923 1031 aa16.08■□□□□ 0.16
PALB2-205ENST00000567003 RPS24P62847 133 aaKnown RBP16.08■□□□□ 0.16
PALB2-205ENST00000567003 ENPEPQ07075 957 aa16.08■□□□□ 0.16
PALB2-205ENST00000567003 DPYDQ12882 1025 aa16.08■□□□□ 0.16
PALB2-205ENST00000567003 TARDBPQ13148 414 aaKnown RBP eCLIP16.08■□□□□ 0.16
PALB2-205ENST00000567003 CUL2Q13617 745 aa16.08■□□□□ 0.16
PALB2-205ENST00000567003 CST6Q15828 149 aa16.08■□□□□ 0.16
PALB2-205ENST00000567003 HES3Q5TGS1 186 aa16.08■□□□□ 0.16
PALB2-205ENST00000567003 USP30Q70CQ3 517 aa16.08■□□□□ 0.16
PALB2-205ENST00000567003 GUF1Q8N442 669 aaKnown RBP16.08■□□□□ 0.16
PALB2-205ENST00000567003 CARNMT1Q8N4J0 409 aa16.08■□□□□ 0.16
PALB2-205ENST00000567003 SAP25Q8TEE9 199 aa16.08■□□□□ 0.16
PALB2-205ENST00000567003 ABCC13Q9NSE7 274 aa16.08■□□□□ 0.16
PALB2-205ENST00000567003 HESX1Q9UBX0 185 aa16.08■□□□□ 0.16
PALB2-205ENST00000567003 AK5Q9Y6K8 562 aa16.08■□□□□ 0.16
PALB2-205ENST00000567003 ZNF462Q96JM2 2506 aa16.08■□□□□ 0.16
PALB2-205ENST00000567003 DOCK9Q9BZ29 2069 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 TENM4Q6N022 2769 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 ATMQ13315 3056 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 A0A1W2PR77 199 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 O00370 1275 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 ACSL4O60488 711 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 IGLV3-27P01718 113 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 CMA1P23946 247 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 EIF2S3P41091 472 aaKnown RBP16.07■□□□□ 0.16
PALB2-205ENST00000567003 NDUFA8P51970 172 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 ST8SIA6P61647 398 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 LRMPQ12912 555 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 BNIP3Q12983 259 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 HNRNPA1L2Q32P51 320 aaKnown RBP16.07■□□□□ 0.16
PALB2-205ENST00000567003 DCAF17Q5H9S7 520 aaPredicted RBP16.07■□□□□ 0.16
PALB2-205ENST00000567003 FSCBQ5H9T9 825 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 C6orf118Q5T5N4 469 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 C9orf64Q5T6V5 341 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 MSANTD2Q6P1R3 559 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 CFAP52Q8N1V2 620 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 AADATQ8N5Z0 425 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 HJURPQ8NCD3 748 aaPredicted RBP16.07■□□□□ 0.16
PALB2-205ENST00000567003 TFAP2BQ92481 460 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 SLC39A7Q92504 469 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 TTC17Q96AE7 1141 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 OMDQ99983 421 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 PRORYQ9H606 182 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 USP25Q9UHP3 1055 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 CFAP45Q9UL16 551 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 PCDHGA1Q9Y5H4 931 aa16.07■□□□□ 0.16
PALB2-205ENST00000567003 E9PAM4 449 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 DFNA5O60443 496 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 MYL1P05976 194 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 EPB41P11171 864 aaKnown RBP16.06■□□□□ 0.16
PALB2-205ENST00000567003 CD38P28907 300 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 EPHA8P29322 1005 aaPredicted RBP16.06■□□□□ 0.16
PALB2-205ENST00000567003 SLC8A1P32418 973 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 HNF1BP35680 557 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 SYKP43405 635 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 SLC11A2P49281 568 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 TBX4P57082 545 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 PPP2CBP62714 309 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 PPP2CAP67775 309 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 PKDCCQ504Y2 493 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 PITRM1Q5JRX3 1037 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 TCERG1LQ5VWI1 586 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 PMF1Q6P1K2 205 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 STK40Q8N2I9 435 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 UBR7Q8N806 425 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 OR2T34Q8NGX1 318 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 FIBINQ8TAL6 211 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 KCTD13Q8WZ19 329 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 CCDC47Q96A33 483 aaKnown RBP16.06■□□□□ 0.16
PALB2-205ENST00000567003 FAXDC2Q96IV6 333 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 ZSWIM1Q9BR11 485 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 NUCKS1Q9H1E3 243 aaKnown RBP16.06■□□□□ 0.16
PALB2-205ENST00000567003 CNGB3Q9NQW8 809 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 ERVW-1Q9UQF0 538 aa16.06■□□□□ 0.16
PALB2-205ENST00000567003 LRRC72A6NJI9 287 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms