RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 NME7Q9Y5B8 376 aa17.23■□□□□ 0.35
CMTM3-213ENST00000566756 SCN1AP35498 2009 aa17.23■□□□□ 0.35
CMTM3-213ENST00000566756 CYB561D2O14569 222 aa17.22■□□□□ 0.35
CMTM3-213ENST00000566756 TBX10O75333 385 aa17.22■□□□□ 0.35
CMTM3-213ENST00000566756 CABYRO75952 493 aa17.22■□□□□ 0.35
CMTM3-213ENST00000566756 GSRP00390 522 aa17.22■□□□□ 0.35
CMTM3-213ENST00000566756 PGAM1P18669 254 aa17.22■□□□□ 0.35
CMTM3-213ENST00000566756 GLUD2P49448 558 aa17.22■□□□□ 0.35
CMTM3-213ENST00000566756 EFHC1Q5JVL4 640 aa17.22■□□□□ 0.35
CMTM3-213ENST00000566756 MBLAC2Q68D91 279 aa17.22■□□□□ 0.35
CMTM3-213ENST00000566756 SCUBE1Q8IWY4 988 aa17.22■□□□□ 0.35
CMTM3-213ENST00000566756 RBM15BQ8NDT2 890 aaKnown RBP17.22■□□□□ 0.35
CMTM3-213ENST00000566756 PIWIL2Q8TC59 973 aaKnown RBP17.22■□□□□ 0.35
CMTM3-213ENST00000566756 FAM167BQ9BTA0 163 aa17.22■□□□□ 0.35
CMTM3-213ENST00000566756 B3GNT5Q9BYG0 378 aa17.22■□□□□ 0.35
CMTM3-213ENST00000566756 GPAMQ9HCL2 828 aa17.22■□□□□ 0.35
CMTM3-213ENST00000566756 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.22■□□□□ 0.35
CMTM3-213ENST00000566756 CDY2AQ9Y6F7 541 aa17.22■□□□□ 0.35
CMTM3-213ENST00000566756 H3BRJ5 948 aa17.22■□□□□ 0.35
CMTM3-213ENST00000566756 CIB2O75838 187 aa17.22■□□□□ 0.35
CMTM3-213ENST00000566756 ENO1P06733 434 aaKnown RBP17.22■□□□□ 0.35
CMTM3-213ENST00000566756 GRK2P25098 689 aa17.22■□□□□ 0.35
CMTM3-213ENST00000566756 PACS1Q6VY07 963 aa17.22■□□□□ 0.35
CMTM3-213ENST00000566756 NXF3Q9H4D5 531 aaKnown RBP17.22■□□□□ 0.35
CMTM3-213ENST00000566756 RECQL4O94761 1208 aa17.21■□□□□ 0.35
CMTM3-213ENST00000566756 KLHL2O95198 593 aa17.21■□□□□ 0.35
CMTM3-213ENST00000566756 MAP3K6O95382 1288 aa17.21■□□□□ 0.35
CMTM3-213ENST00000566756 TFE3P19532 575 aaPredicted RBP17.21■□□□□ 0.35
CMTM3-213ENST00000566756 MATKP42679 507 aa17.21■□□□□ 0.35
CMTM3-213ENST00000566756 ACTR3P61158 418 aa17.21■□□□□ 0.35
CMTM3-213ENST00000566756 THOC5Q13769 683 aaKnown RBP17.21■□□□□ 0.35
CMTM3-213ENST00000566756 ARHGEF6Q15052 776 aa17.21■□□□□ 0.35
CMTM3-213ENST00000566756 SOWAHAQ2M3V2 549 aa17.21■□□□□ 0.35
CMTM3-213ENST00000566756 FASTKD1Q53R41 847 aaKnown RBP17.21■□□□□ 0.35
CMTM3-213ENST00000566756 RNF180Q86T96 592 aa17.21■□□□□ 0.35
CMTM3-213ENST00000566756 OR6B3Q8NGW1 331 aa17.21■□□□□ 0.35
CMTM3-213ENST00000566756 RAET1EQ8TD07 263 aa17.21■□□□□ 0.35
CMTM3-213ENST00000566756 NRG4Q8WWG1 115 aa17.21■□□□□ 0.35
CMTM3-213ENST00000566756 SCG3Q8WXD2 468 aaKnown RBP17.21■□□□□ 0.35
CMTM3-213ENST00000566756 ZMAT2Q96NC0 199 aaKnown RBP17.21■□□□□ 0.35
CMTM3-213ENST00000566756 CHST12Q9NRB3 414 aa17.21■□□□□ 0.35
CMTM3-213ENST00000566756 FZD10Q9ULW2 581 aa17.21■□□□□ 0.35
CMTM3-213ENST00000566756 PLIN3O60664 434 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 SERPINE1P05121 402 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 KCNE1P15382 129 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 VAV1P15498 845 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 ALOX15P16050 662 aaPredicted RBP17.2■□□□□ 0.34
CMTM3-213ENST00000566756 VEGFBP49765 207 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 PRMT2P55345 433 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 MGAT3Q09327 533 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 FRG1Q14331 258 aaKnown RBP17.2■□□□□ 0.34
CMTM3-213ENST00000566756 SLC25A52Q3SY17 297 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 C9orf57Q5W0N0 161 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 MYLK4Q86YV6 388 aaPredicted RBP17.2■□□□□ 0.34
CMTM3-213ENST00000566756 PPP1R14CQ8TAE6 165 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 ISL2Q96A47 359 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 FAM161BQ96MY7 647 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 C20orf27Q9GZN8 174 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 SENP6Q9GZR1 1112 aaPredicted RBP17.2■□□□□ 0.34
CMTM3-213ENST00000566756 VCXQ9H320 206 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 GDAP2Q9NXN4 497 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 EMCNQ9ULC0 261 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 UBQLN1Q9UMX0 589 aaKnown RBP17.2■□□□□ 0.34
CMTM3-213ENST00000566756 HES2Q9Y543 173 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 CCDC195A0A1B0GUA6 201 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 WDR27A2RRH5 827 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 MAP3K7O43318 606 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 XPOTO43592 962 aaKnown RBP17.2■□□□□ 0.34
CMTM3-213ENST00000566756 CD4P01730 458 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 ALDOAP04075 364 aaKnown RBP17.2■□□□□ 0.34
CMTM3-213ENST00000566756 FGF3P11487 239 aaPredicted RBP17.2■□□□□ 0.34
CMTM3-213ENST00000566756 PNPLA4P41247 253 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 GRIA1P42261 906 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 TUBB3Q13509 450 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 GSTA3Q16772 222 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 TEDDM1Q5T9Z0 273 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 LIMS2Q7Z4I7 341 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 ADGRG6Q86SQ4 1221 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 ULK2Q8IYT8 1036 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 CCDC185Q8N715 623 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 COLGALT1Q8NBJ5 622 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 ARNTL2Q8WYA1 636 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 RILPQ96NA2 401 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 DNAJC28Q9NX36 388 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 IGSF9Q9P2J2 1179 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 ADAM28Q9UKQ2 775 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 SOX13Q9UN79 622 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 FRMPD3Q5JV73 1810 aa17.2■□□□□ 0.34
CMTM3-213ENST00000566756 PPEF2O14830 753 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 FKBP6O75344 327 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 NEBLO76041 1014 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 LINGO3P0C6S8 592 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 AMPD1P23109 780 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 CDC25CP30307 473 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 PDE1CQ14123 709 aaPredicted RBP17.19■□□□□ 0.34
CMTM3-213ENST00000566756 PDK1Q15118 436 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 TMCO4Q5TGY1 634 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 AAGABQ6PD74 315 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 DENND5BQ6ZUT9 1274 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 BNIPLQ7Z465 357 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms