RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 BIRC7Q96CA5 298 aa15.54■□□□□ 0.08
RNF40-209ENST00000566703 PRICKLE1Q96MT3 831 aaPredicted RBP15.54■□□□□ 0.08
RNF40-209ENST00000566703 SRRTQ9BXP5 876 aaKnown RBP15.54■□□□□ 0.08
RNF40-209ENST00000566703 THAP9Q9H5L6 903 aa15.54■□□□□ 0.08
RNF40-209ENST00000566703 IL21RQ9HBE5 538 aa15.54■□□□□ 0.08
RNF40-209ENST00000566703 TM9SF3Q9HD45 589 aa15.54■□□□□ 0.08
RNF40-209ENST00000566703 UBE2TQ9NPD8 197 aaPredicted RBP15.54■□□□□ 0.08
RNF40-209ENST00000566703 ST7Q9NRC1 585 aa15.54■□□□□ 0.08
RNF40-209ENST00000566703 INTS6Q9UL03 887 aaKnown RBP15.54■□□□□ 0.08
RNF40-209ENST00000566703 ANKRD6Q9Y2G4 727 aa15.54■□□□□ 0.08
RNF40-209ENST00000566703 CACNA1EQ15878 2313 aa15.54■□□□□ 0.08
RNF40-209ENST00000566703 CAPN9O14815 690 aa15.53■□□□□ 0.08
RNF40-209ENST00000566703 DFNA5O60443 496 aa15.53■□□□□ 0.08
RNF40-209ENST00000566703 LUC7L3O95232 432 aaKnown RBP15.53■□□□□ 0.08
RNF40-209ENST00000566703 MOCS3O95396 460 aa15.53■□□□□ 0.08
RNF40-209ENST00000566703 APOEP02649 317 aa15.53■□□□□ 0.08
RNF40-209ENST00000566703 CAPNS1P04632 268 aa15.53■□□□□ 0.08
RNF40-209ENST00000566703 KRT5P13647 590 aa15.53■□□□□ 0.08
RNF40-209ENST00000566703 CSKP41240 450 aa15.53■□□□□ 0.08
RNF40-209ENST00000566703 RPS24P62847 133 aaKnown RBP15.53■□□□□ 0.08
RNF40-209ENST00000566703 PAK1Q13153 545 aa15.53■□□□□ 0.08
RNF40-209ENST00000566703 CDH18Q13634 790 aa15.53■□□□□ 0.08
RNF40-209ENST00000566703 KIF19Q2TAC6 998 aa15.53■□□□□ 0.08
RNF40-209ENST00000566703 DCAF6Q58WW2 860 aa15.53■□□□□ 0.08
RNF40-209ENST00000566703 CCNI2Q6ZMN8 369 aaPredicted RBP15.53■□□□□ 0.08
RNF40-209ENST00000566703 BAHD1Q8TBE0 780 aaPredicted RBP15.53■□□□□ 0.08
RNF40-209ENST00000566703 SNX19Q92543 992 aa15.53■□□□□ 0.08
RNF40-209ENST00000566703 IGSF8Q969P0 613 aa15.53■□□□□ 0.08
RNF40-209ENST00000566703 BTN2A3PQ96KV6 586 aa15.53■□□□□ 0.08
RNF40-209ENST00000566703 MRGPRX3Q96LB0 322 aa15.53■□□□□ 0.08
RNF40-209ENST00000566703 INTS2Q9H0H0 1204 aaKnown RBP15.53■□□□□ 0.08
RNF40-209ENST00000566703 PABPC3Q9H361 631 aaKnown RBP15.53■□□□□ 0.08
RNF40-209ENST00000566703 POPDC2Q9HBU9 364 aa15.53■□□□□ 0.08
RNF40-209ENST00000566703 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.53■□□□□ 0.08
RNF40-209ENST00000566703 SLC12A6Q9UHW9 1150 aa15.53■□□□□ 0.08
RNF40-209ENST00000566703 TPX2Q9ULW0 747 aaKnown RBP15.53■□□□□ 0.08
RNF40-209ENST00000566703 FNDC3AQ9Y2H6 1198 aaKnown RBP15.53■□□□□ 0.08
RNF40-209ENST00000566703 PAPSS1O43252 624 aaPredicted RBP15.52■□□□□ 0.08
RNF40-209ENST00000566703 PCDHGA12O60330 932 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 SIN3BO75182 1162 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 CALCAP01258 141 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 IGLV3-25P01717 112 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 GLI1P08151 1106 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 OXCT1P55809 520 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 YWHAZP63104 245 aaKnown RBP15.52■□□□□ 0.08
RNF40-209ENST00000566703 MTA1Q13330 715 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 EIF4EBP2Q13542 120 aaPredicted RBP15.52■□□□□ 0.08
RNF40-209ENST00000566703 SLC12A1Q13621 1099 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 FSCBQ5H9T9 825 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 PITRM1Q5JRX3 1037 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 SYPL2Q5VXT5 272 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 KIAA0895LQ68EN5 471 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 DENND1BQ6P3S1 775 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 SLCO6A1Q86UG4 719 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 CARNMT1Q8N4J0 409 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 ATP6V0D2Q8N8Y2 350 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 RHBDD1Q8TEB9 315 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 NUCKS1Q9H1E3 243 aaKnown RBP15.52■□□□□ 0.08
RNF40-209ENST00000566703 FBXL12Q9NXK8 326 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 TJP2Q9UDY2 1190 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 CTNND2Q9UQB3 1225 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 ERVW-1Q9UQF0 538 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 SNX11Q9Y5W9 270 aa15.52■□□□□ 0.08
RNF40-209ENST00000566703 LAMA1P25391 3075 aa15.52■□□□□ 0.07
RNF40-209ENST00000566703 ITIH6Q6UXX5 1313 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 DKK1O94907 266 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 FSBPO95073 299 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 LETM1O95202 739 aaPredicted RBP15.51■□□□□ 0.07
RNF40-209ENST00000566703 TRUB2O95900 331 aaKnown RBP15.51■□□□□ 0.07
RNF40-209ENST00000566703 SLC2A3P11169 496 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 NNMTP40261 264 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 GALCP54803 685 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 STX17P56962 302 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 RACK1P63244 317 aaKnown RBP15.51■□□□□ 0.07
RNF40-209ENST00000566703 ECT2LQ008S8 904 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 CST6Q15828 149 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 C9orf64Q5T6V5 341 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 TAC4Q86UU9 113 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 LGI2Q8N0V4 545 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 CFAP52Q8N1V2 620 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 PNPLA1Q8N8W4 532 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 SKA1Q96BD8 255 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 MYEOVQ96EZ4 313 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 PPP1R9BQ96SB3 815 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 ORAI3Q9BRQ5 295 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 MTG2Q9H4K7 406 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 ADAMTS1Q9UHI8 967 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 FZD4Q9ULV1 537 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 USP24Q9UPU5 2620 aa15.51■□□□□ 0.07
RNF40-209ENST00000566703 EDDM13A0A1B0GTR0 161 aa15.5■□□□□ 0.07
RNF40-209ENST00000566703 A0A1W2PPC4 97 aa15.5■□□□□ 0.07
RNF40-209ENST00000566703 LRRC72A6NJI9 287 aa15.5■□□□□ 0.07
RNF40-209ENST00000566703 C10orf142B7Z368 130 aa15.5■□□□□ 0.07
RNF40-209ENST00000566703 BIN1O00499 593 aa15.5■□□□□ 0.07
RNF40-209ENST00000566703 VILLO15195 856 aa15.5■□□□□ 0.07
RNF40-209ENST00000566703 IGHV4-34P06331 123 aa15.5■□□□□ 0.07
RNF40-209ENST00000566703 TACR2P21452 398 aa15.5■□□□□ 0.07
RNF40-209ENST00000566703 GNA15P30679 374 aa15.5■□□□□ 0.07
RNF40-209ENST00000566703 SLC8A1P32418 973 aa15.5■□□□□ 0.07
RNF40-209ENST00000566703 VASPP50552 380 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms