RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 KCNH6Q9H252 994 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TTC12Q9H892 705 aaPredicted RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 COPS7BQ9H9Q2 264 aaPredicted RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TMLHEQ9NVH6 421 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 BEX4Q9NWD9 120 aaPredicted RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 HSPBP1Q9NZL4 362 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 SLC25A10Q9UBX3 287 aaPredicted RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 MKLN1Q9UL63 735 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 NFU1Q9UMS0 254 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 DRG1Q9Y295 367 aaKnown RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TRAV34A0A0B4J273 112 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 CCDC69A6NI79 296 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 PI4K2BG5E9Z4 385 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 INO80B-WBP1J3KQ70 363 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 AGPSO00116 658 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 CHL1O00533 1208 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 NRP1O14786 923 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 LDLRAD4O15165 306 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 CD3EAPO15446 510 aaKnown RBP3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 DHHO43323 396 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 SEC14L2O76054 403 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 POMCP01189 267 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 FSHBP01225 129 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 AMHP03971 560 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 EIF2S1P05198 315 aaKnown RBP3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 URODP06132 367 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 SNRPA1P09661 255 aaKnown RBP3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 ATXN1LP0C7T5 689 aaKnown RBP3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 CYP2C8P10632 490 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 LYL1P12980 280 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 FDPSP14324 419 aaKnown RBP3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 FDXRP22570 491 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 RBL1P28749 1068 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 MCM7P33993 719 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 GP5P40197 560 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 GPD2P43304 727 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 MTHFSP49914 203 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 HSD17B4P51659 736 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 HMGA2P52926 109 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 RCAN1P53805 252 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 ADAM17P78536 824 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 CEBPZQ03701 1054 aaKnown RBP3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 YWHAHQ04917 246 aaPredicted RBP3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 DDR1Q08345 913 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 C17orf67Q0P5P2 114 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 RTP5Q14D33 572 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 TBRG1Q3YBR2 411 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 SETMARQ53H47 684 aaPredicted RBP3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 ZNF766Q5HY98 468 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 RAB41Q5JT25 222 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 C9orf152Q5JTZ5 239 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 KRT80Q6KB66 452 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 DENND1BQ6P3S1 775 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 TRMT10BQ6PF06 316 aaKnown RBP3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 TRAT1Q6PIZ9 186 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 MTHFD1LQ6UB35 978 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 KIAA1324Q6UXG2 1013 aaKnown RBP3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 PIK3AP1Q6ZUJ8 805 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 NUP54Q7Z3B4 507 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 PPP1R32Q7Z5V6 425 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 XYLT1Q86Y38 959 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 LRRC71Q8N4P6 559 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 ZNF366Q8N895 744 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 ANKRD53Q8N9V6 530 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 RNF169Q8NCN4 708 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 PSD4Q8NDX1 1056 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 OR14K1Q8NGZ2 314 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 LILRB1Q8NHL6 650 aaPredicted RBP3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 MBD3L2Q8NHZ7 208 aaPredicted RBP3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 GRK7Q8WTQ7 553 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 MZB1Q8WU39 189 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 POMGNT1Q8WZA1 660 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 KCNJ9Q92806 393 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 SLC22A18Q96BI1 424 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 RNFT2Q96EX2 444 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 CCDC114Q96M63 670 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 TMEM237Q96Q45 408 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 SMOQ99835 787 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 TEX12Q9BXU0 123 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 KATNBL1Q9H079 304 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 CXorf36Q9H7Y0 433 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 SYNPO2LQ9H987 977 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 LTB4R2Q9NPC1 389 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 FBXO28Q9NVF7 368 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 HPF1Q9NWY4 346 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 ADPRHL2Q9NX46 363 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 PPP1R14DQ9NXH3 145 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 TRMT1Q9NXH9 659 aaKnown RBP3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 SELENONQ9NZV5 590 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 DNAJB9Q9UBS3 223 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 RGS17Q9UGC6 210 aaPredicted RBP3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 BLOC1S6Q9UL45 172 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 PPIEQ9UNP9 301 aaKnown RBP3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 ZBTB1Q9Y2K1 713 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 NEU2Q9Y3R4 380 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 TRIM17Q9Y577 477 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 ENTPD2Q9Y5L3 495 aa3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 EIF4G1Q04637 1599 aaKnown RBP3.54□□□□□ -1.84
HERPUD1-211ENST00000566550 ADGRF5Q8IZF2 1346 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 FRMD3A2A2Y4 597 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms