RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 RFC1P35251 1148 aaPredicted RBP13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 IL12RB1P42701 662 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 PTPN9P43378 593 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 IRAK1P51617 712 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 SIM2Q14190 667 aaPredicted RBP13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 ZNF234Q14588 700 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 CDO1Q16878 200 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 FUT11Q495W5 492 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 FSCBQ5H9T9 825 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 RABGAP1LQ5R372 815 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 SH3PXD2AQ5TCZ1 1133 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 TTC39BQ5VTQ0 682 aaPredicted RBP13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 HGSNATQ68CP4 663 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 MBLAC2Q68D91 279 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 KIAA1211LQ6NV74 962 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 PPP1R2P3Q6NXS1 205 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 PRR23BQ6ZRT6 265 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 CEP68Q76N32 757 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 C14orf80Q86SX3 495 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 DNAAF5Q86Y56 855 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 CCDC117Q8IWD4 279 aaPredicted RBP13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 CYB5D2Q8WUJ1 264 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 HMGB4Q8WW32 186 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 GAB3Q8WWW8 586 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 IGSF8Q969P0 613 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 ERLEC1Q96DZ1 483 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 RPRD1AQ96P16 312 aaPredicted RBP13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 CD248Q9HCU0 757 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 VANGL2Q9ULK5 521 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 LUC7L2Q9Y383 392 aaKnown RBP13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 RAD54BQ9Y620 910 aa13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 MYO18AQ92614 2054 aaKnown RBP13.31□□□□□ -0.28
CNEP1R1-208ENST00000566482 A0A1B0GVM2 712 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 TCAF2A6NFQ2 919 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 ATMINO43313 823 aaPredicted RBP13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 RPP40O75818 363 aaKnown RBP13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 SERPING1P05155 500 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 ATXN8OSP0DMR3 200 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 GZMAP12544 262 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 GPD1P21695 349 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 RRM1P23921 792 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 PRKCHP24723 683 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 CASP14P31944 242 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 ENPP2Q13822 863 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 E2F5Q15329 346 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 LPAL2Q16609 132 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 FNDC3BQ53EP0 1204 aaKnown RBP13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 PPP1R15BQ5SWA1 713 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 SPECC1LQ69YQ0 1117 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 WDR59Q6PJI9 974 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 STRADAQ7RTN6 431 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 ZNF683Q8IZ20 524 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 CCAR2Q8N163 923 aaKnown RBP13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 VCPIP1Q96JH7 1222 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 MCEEQ96PE7 176 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 BCCIPQ9P287 314 aaKnown RBP eCLIP13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 INTS6Q9UL03 887 aaKnown RBP13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 RAB23Q9ULC3 237 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 INVSQ9Y283 1065 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 EML5Q05BV3 1969 aa13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 MUC22E2RYF6 1773 aaPredicted RBP13.3□□□□□ -0.28
CNEP1R1-208ENST00000566482 ANKRD62A6NC57 917 aa13.29□□□□□ -0.28
CNEP1R1-208ENST00000566482 RTN2O75298 545 aa13.29□□□□□ -0.28
CNEP1R1-208ENST00000566482 FTLP02792 175 aaPredicted RBP13.29□□□□□ -0.28
CNEP1R1-208ENST00000566482 PLEKP08567 350 aaPredicted RBP13.29□□□□□ -0.28
CNEP1R1-208ENST00000566482 DLDP09622 509 aaKnown RBP13.29□□□□□ -0.28
CNEP1R1-208ENST00000566482 GABRG2P18507 467 aa13.29□□□□□ -0.28
CNEP1R1-208ENST00000566482 POLR2EP19388 210 aaKnown RBP13.29□□□□□ -0.28
CNEP1R1-208ENST00000566482 CSKP41240 450 aa13.29□□□□□ -0.28
CNEP1R1-208ENST00000566482 RPL7AP62424 266 aaKnown RBP13.29□□□□□ -0.28
CNEP1R1-208ENST00000566482 TRIM14Q14142 442 aa13.29□□□□□ -0.28
CNEP1R1-208ENST00000566482 PITRM1Q5JRX3 1037 aa13.29□□□□□ -0.28
CNEP1R1-208ENST00000566482 CXorf57Q6NSI4 855 aaKnown RBP13.29□□□□□ -0.28
CNEP1R1-208ENST00000566482 SERPINA13PQ6UXR4 307 aa13.29□□□□□ -0.28
CNEP1R1-208ENST00000566482 PGBD3Q8N328 593 aa13.29□□□□□ -0.28
CNEP1R1-208ENST00000566482 FAM172AQ8WUF8 416 aa13.29□□□□□ -0.28
CNEP1R1-208ENST00000566482 CENPIQ92674 756 aaPredicted RBP13.29□□□□□ -0.28
CNEP1R1-208ENST00000566482 TTC17Q96AE7 1141 aa13.29□□□□□ -0.28
CNEP1R1-208ENST00000566482 HAPLN3Q96S86 360 aa13.29□□□□□ -0.28
CNEP1R1-208ENST00000566482 KIAA1522Q9P206 1035 aaPredicted RBP13.29□□□□□ -0.28
CNEP1R1-208ENST00000566482 BZW2Q9Y6E2 419 aaKnown RBP13.29□□□□□ -0.28
CNEP1R1-208ENST00000566482 MYO15AQ9UKN7 3530 aa13.28□□□□□ -0.28
CNEP1R1-208ENST00000566482 DCLK1O15075 740 aa13.28□□□□□ -0.28
CNEP1R1-208ENST00000566482 CCP110O43303 1012 aa13.28□□□□□ -0.28
CNEP1R1-208ENST00000566482 CNTN5O94779 1100 aa13.28□□□□□ -0.28
CNEP1R1-208ENST00000566482 ATP5BP06576 529 aaKnown RBP13.28□□□□□ -0.28
CNEP1R1-208ENST00000566482 HLA-EP13747 358 aa13.28□□□□□ -0.28
CNEP1R1-208ENST00000566482 NDUFV2P19404 249 aa13.28□□□□□ -0.28
CNEP1R1-208ENST00000566482 ZNF143P52747 638 aaPredicted RBP13.28□□□□□ -0.28
CNEP1R1-208ENST00000566482 HDAC4P56524 1084 aa13.28□□□□□ -0.28
CNEP1R1-208ENST00000566482 MAMLD1Q13495 774 aa13.28□□□□□ -0.28
CNEP1R1-208ENST00000566482 STARD3Q14849 445 aa13.28□□□□□ -0.28
CNEP1R1-208ENST00000566482 PTPRNQ16849 979 aa13.28□□□□□ -0.28
CNEP1R1-208ENST00000566482 C5orf22Q49AR2 442 aa13.28□□□□□ -0.28
CNEP1R1-208ENST00000566482 USP39Q53GS9 565 aaKnown RBP13.28□□□□□ -0.28
CNEP1R1-208ENST00000566482 ARTNQ5T4W7 220 aa13.28□□□□□ -0.28
CNEP1R1-208ENST00000566482 ACBD5Q5T8D3 534 aaPredicted RBP13.28□□□□□ -0.28
CNEP1R1-208ENST00000566482 LAIR1Q6GTX8 287 aa13.28□□□□□ -0.28
CNEP1R1-208ENST00000566482 PLEKHA7Q6IQ23 1121 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms