RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 PPP1R14DQ9NXH3 145 aa5.52□□□□□ -1.53
CNOT1-209ENST00000566240 TBC1D14Q9P2M4 693 aa5.52□□□□□ -1.53
CNOT1-209ENST00000566240 SLC25A10Q9UBX3 287 aaPredicted RBP5.52□□□□□ -1.53
CNOT1-209ENST00000566240 FZD4Q9ULV1 537 aa5.52□□□□□ -1.53
CNOT1-209ENST00000566240 GPR34Q9UPC5 381 aa5.52□□□□□ -1.53
CNOT1-209ENST00000566240 NISCHQ9Y2I1 1504 aa5.52□□□□□ -1.53
CNOT1-209ENST00000566240 QSOX1O00391 747 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 URI1O94763 535 aaPredicted RBP5.51□□□□□ -1.53
CNOT1-209ENST00000566240 C1SP09871 688 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 NPSP0C0P6 89 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 HSPA1AP0DMV8 641 aaKnown RBP5.51□□□□□ -1.53
CNOT1-209ENST00000566240 HSPA1BP0DMV9 641 aaKnown RBP5.51□□□□□ -1.53
CNOT1-209ENST00000566240 UBL4AP11441 157 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 NDUFB7P17568 137 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 AVPR2P30518 371 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 SLC8A1P32418 973 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 STAT1P42224 750 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 MVDP53602 400 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 ARF3P61204 181 aaPredicted RBP5.51□□□□□ -1.53
CNOT1-209ENST00000566240 ARF1P84077 181 aaKnown RBP5.51□□□□□ -1.53
CNOT1-209ENST00000566240 PTP4A2Q12974 167 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 ALKBH1Q13686 389 aaKnown RBP5.51□□□□□ -1.53
CNOT1-209ENST00000566240 NAA25Q14CX7 972 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 MEA1Q16626 185 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 ANKRD16Q6P6B7 361 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 INO80CQ6PI98 192 aaPredicted RBP5.51□□□□□ -1.53
CNOT1-209ENST00000566240 KCNV1Q6PIU1 500 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 KIRREL2Q6UWL6 708 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 SLC39A5Q6ZMH5 540 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 Q6ZNX1 250 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 LAS2Q8IYD9 372 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 ZNF366Q8N895 744 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 ENDOVQ8N8Q3 282 aaKnown RBP5.51□□□□□ -1.53
CNOT1-209ENST00000566240 BEND2Q8NDZ0 799 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 RFWD2Q8NHY2 731 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 RUFY2Q8WXA3 655 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 AKAP1Q92667 903 aaKnown RBP eCLIP5.51□□□□□ -1.53
CNOT1-209ENST00000566240 ELP4Q96EB1 424 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 THAP7Q9BT49 309 aaPredicted RBP5.51□□□□□ -1.53
CNOT1-209ENST00000566240 HTATIP2Q9BUP3 242 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 FSD1LQ9BXM9 530 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 SLC22A11Q9NSA0 550 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 BEX4Q9NWD9 120 aaPredicted RBP5.51□□□□□ -1.53
CNOT1-209ENST00000566240 TAS2R10Q9NYW0 307 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 KLQ9UEF7 1012 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 CNOT11Q9UKZ1 510 aaKnown RBP5.51□□□□□ -1.53
CNOT1-209ENST00000566240 ADAMTS5Q9UNA0 930 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 B3GNT3Q9Y2A9 372 aa5.51□□□□□ -1.53
CNOT1-209ENST00000566240 GOLGA6L10A0A0M3HER8 536 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 NPIPB13A6NJU9 1138 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 NPIPB5A8MRT5 1133 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 TTC34A8MYJ7 566 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 NPIPB4C9JG80 1138 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 H0YIZ8 118 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 PDE8BO95263 885 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 METTL18O95568 372 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 ARSAP15289 507 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 RPS6KB1P23443 525 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 PRPH2P23942 346 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 FPR3P25089 353 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 EPHA8P29322 1005 aaPredicted RBP5.5□□□□□ -1.53
CNOT1-209ENST00000566240 COPB1P53618 953 aaKnown RBP5.5□□□□□ -1.53
CNOT1-209ENST00000566240 EEFSECP57772 596 aaKnown RBP5.5□□□□□ -1.53
CNOT1-209ENST00000566240 BLOC1S1P78537 153 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 NUCB1Q02818 461 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 CFHR3Q02985 330 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 MPP3Q13368 585 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 GAB1Q13480 694 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 EIF4A2Q14240 407 aaKnown RBP5.5□□□□□ -1.53
CNOT1-209ENST00000566240 TBCEQ15813 527 aaPredicted RBP5.5□□□□□ -1.53
CNOT1-209ENST00000566240 RNASE12Q5GAN4 147 aaKnown RBP5.5□□□□□ -1.53
CNOT1-209ENST00000566240 ZNF766Q5HY98 468 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 SPDYAQ5MJ70 313 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 LY6G5CQ5SRR4 150 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 SNX30Q5VWJ9 437 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 CCDC129Q6ZRS4 1044 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 PROKR1Q8TCW9 393 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 CUL5Q93034 780 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 NUDT16L1Q9BRJ7 211 aaKnown RBP5.5□□□□□ -1.53
CNOT1-209ENST00000566240 SLC25A18Q9H1K4 315 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 TTYH1Q9H313 450 aaPredicted RBP5.5□□□□□ -1.53
CNOT1-209ENST00000566240 GHITMQ9H3K2 345 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 SEMA4BQ9NPR2 832 aaPredicted RBP5.5□□□□□ -1.53
CNOT1-209ENST00000566240 SMPD4Q9NXE4 827 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 ZDHHC7Q9NXF8 308 aa5.5□□□□□ -1.53
CNOT1-209ENST00000566240 GAGE10A6NGK3 116 aa5.49□□□□□ -1.53
CNOT1-209ENST00000566240 PTP4A3O75365 173 aa5.49□□□□□ -1.53
CNOT1-209ENST00000566240 TTLL1O95922 423 aa5.49□□□□□ -1.53
CNOT1-209ENST00000566240 SLC3A2P08195 630 aaKnown RBP5.49□□□□□ -1.53
CNOT1-209ENST00000566240 EBLN1P0CF75 366 aa5.49□□□□□ -1.53
CNOT1-209ENST00000566240 SFPQP23246 707 aaKnown RBP eCLIP5.49□□□□□ -1.53
CNOT1-209ENST00000566240 HNF1BP35680 557 aa5.49□□□□□ -1.53
CNOT1-209ENST00000566240 RPS6KA3P51812 740 aa5.49□□□□□ -1.53
CNOT1-209ENST00000566240 SLC37A1P57057 533 aa5.49□□□□□ -1.53
CNOT1-209ENST00000566240 WDR5P61964 334 aaKnown RBP5.49□□□□□ -1.53
CNOT1-209ENST00000566240 ARHGAP8P85298 464 aa5.49□□□□□ -1.53
CNOT1-209ENST00000566240 CCNG2Q16589 344 aa5.49□□□□□ -1.53
CNOT1-209ENST00000566240 ERCC6LQ2NKX8 1250 aa5.49□□□□□ -1.53
CNOT1-209ENST00000566240 PCID2Q5JVF3 399 aa5.49□□□□□ -1.53
CNOT1-209ENST00000566240 SH2D4BQ5SQS7 431 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms