RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 FAM83CQ9BQN1 747 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 CALN1Q9BXU9 219 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 KCNK12Q9HB15 430 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 SPHK2Q9NRA0 654 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 PPARGC1AQ9UBK2 798 aaKnown RBP15.27■□□□□ 0.04
SPG7-213ENST00000566221 SHROOM3Q8TF72 1996 aa15.27■□□□□ 0.03
SPG7-213ENST00000566221 PI4K2BG5E9Z4 385 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 ENC1O14682 589 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 TRDMT1O14717 391 aaKnown RBP15.26■□□□□ 0.03
SPG7-213ENST00000566221 FGF10O15520 208 aaPredicted RBP15.26■□□□□ 0.03
SPG7-213ENST00000566221 TSPAN3O60637 253 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 SRGAP2O75044 1071 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 ZRANB2O95218 330 aaKnown RBP eCLIP15.26■□□□□ 0.03
SPG7-213ENST00000566221 CYP17A1P05093 508 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 CETN2P41208 172 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 HCAR3P49019 387 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 COPS2P61201 443 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 TUBB2AQ13885 445 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 DPYSL3Q14195 570 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 DNTTIP2Q5QJE6 756 aaKnown RBP15.26■□□□□ 0.03
SPG7-213ENST00000566221 MPP7Q5T2T1 576 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 RFX8Q6ZV50 586 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 C14orf80Q86SX3 495 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 CCDC50Q8IVM0 306 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 RCOR2Q8IZ40 523 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 RAPGEF5Q92565 580 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 TSC1Q92574 1164 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 ZFYVE19Q96K21 471 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 NAPGQ99747 312 aaPredicted RBP15.26■□□□□ 0.03
SPG7-213ENST00000566221 RPP25Q9BUL9 199 aaKnown RBP15.26■□□□□ 0.03
SPG7-213ENST00000566221 TUBB2BQ9BVA1 445 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 MAGEB5Q9BZ81 275 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 CARD9Q9H257 536 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 LINC00597Q9H2U6 94 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 RETREG1Q9H6L5 497 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 BRD9Q9H8M2 597 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 MARK1Q9P0L2 795 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 NEU3Q9UQ49 428 aa15.26■□□□□ 0.03
SPG7-213ENST00000566221 NYNRINQ9P2P1 1898 aaKnown RBP15.25■□□□□ 0.03
SPG7-213ENST00000566221 A0A1B0GVM2 712 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 CTAGE9A4FU28 777 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 FAM86C2PA6NEL3 165 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 TCAF2A6NFQ2 919 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 C3orf70A6NLC5 250 aaPredicted RBP15.25■□□□□ 0.03
SPG7-213ENST00000566221 DRGXA6NNA5 263 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 DAPK3O43293 454 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 ATP1A1P05023 1023 aaKnown RBP15.25■□□□□ 0.03
SPG7-213ENST00000566221 CD48P09326 243 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 ADH5P11766 374 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 ARSAP15289 507 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 GOT1P17174 413 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 EPHB2P29323 1055 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 CASQ1P31415 396 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 NR1H3Q13133 447 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 DHCR24Q15392 516 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 LY6G5CQ5SRR4 150 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 SEL1L2Q5TEA6 688 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 TRIM68Q6AZZ1 485 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 RWDD4Q6NW29 188 aaKnown RBP15.25■□□□□ 0.03
SPG7-213ENST00000566221 SPOCD1Q6ZMY3 1216 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 TPGS1Q6ZTW0 290 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 CHST9Q7L1S5 443 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 ADGRG2Q8IZP9 1017 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 DDI1Q8WTU0 396 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 IRF7Q92985 503 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 IGSF8Q969P0 613 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 RNF25Q96BH1 459 aaPredicted RBP15.25■□□□□ 0.03
SPG7-213ENST00000566221 FAF2Q96CS3 445 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 TMA16Q96EY4 203 aaKnown RBP15.25■□□□□ 0.03
SPG7-213ENST00000566221 CSPG4P5Q96PW8 444 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 BBS2Q9BXC9 721 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 ZYG11BQ9C0D3 744 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 EBF3Q9H4W6 596 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 CATSPERBQ9H7T0 1116 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 HPS4Q9NQG7 708 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 CWC15Q9P013 229 aaKnown RBP15.25■□□□□ 0.03
SPG7-213ENST00000566221 STIM2Q9P246 746 aa15.25■□□□□ 0.03
SPG7-213ENST00000566221 C19orf67A6NJJ6 358 aa15.24■□□□□ 0.03
SPG7-213ENST00000566221 NEDD8-MDP1E9PL57 170 aa15.24■□□□□ 0.03
SPG7-213ENST00000566221 ARNTLO00327 626 aa15.24■□□□□ 0.03
SPG7-213ENST00000566221 KCNK3O14649 394 aa15.24■□□□□ 0.03
SPG7-213ENST00000566221 HOXC11O43248 304 aaPredicted RBP15.24■□□□□ 0.03
SPG7-213ENST00000566221 TBL1XO60907 577 aa15.24■□□□□ 0.03
SPG7-213ENST00000566221 CLDN11O75508 207 aa15.24■□□□□ 0.03
SPG7-213ENST00000566221 PENKP01210 267 aaPredicted RBP15.24■□□□□ 0.03
SPG7-213ENST00000566221 ASGR2P07307 311 aa15.24■□□□□ 0.03
SPG7-213ENST00000566221 RHOQP17081 205 aa15.24■□□□□ 0.03
SPG7-213ENST00000566221 PTPN7P35236 360 aa15.24■□□□□ 0.03
SPG7-213ENST00000566221 CDKN2BP42772 138 aa15.24■□□□□ 0.03
SPG7-213ENST00000566221 SGSHP51688 502 aa15.24■□□□□ 0.03
SPG7-213ENST00000566221 CDH4P55283 916 aa15.24■□□□□ 0.03
SPG7-213ENST00000566221 RPS24P62847 133 aaKnown RBP15.24■□□□□ 0.03
SPG7-213ENST00000566221 RUNX3Q13761 415 aa15.24■□□□□ 0.03
SPG7-213ENST00000566221 DPYSQ14117 519 aa15.24■□□□□ 0.03
SPG7-213ENST00000566221 PPP2R5EQ16537 467 aa15.24■□□□□ 0.03
SPG7-213ENST00000566221 TFDP3Q5H9I0 405 aa15.24■□□□□ 0.03
SPG7-213ENST00000566221 ARTNQ5T4W7 220 aa15.24■□□□□ 0.03
SPG7-213ENST00000566221 DCAF12L1Q5VU92 463 aa15.24■□□□□ 0.03
SPG7-213ENST00000566221 FYB2Q5VWT5 728 aa15.24■□□□□ 0.03
SPG7-213ENST00000566221 RNF43Q68DV7 783 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms