RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 PHOSPHO2Q8TCD6 241 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 SCFD1Q8WVM8 642 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 CRELD1Q96HD1 420 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 SEC16BQ96JE7 1060 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 UBXN10Q96LJ8 280 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 ZDHHC15Q96MV8 337 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 CCT8L2Q96SF2 557 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 PLIN2Q99541 437 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 IDI2Q9BXS1 227 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 ZC3H12CQ9C0D7 883 aaKnown RBP5.34□□□□□ -1.55
CAPN3-214ENST00000565274 ISCUQ9H1K1 167 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 DEFB129Q9H1M3 183 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 TAF1DQ9H5J8 278 aaPredicted RBP5.34□□□□□ -1.55
CAPN3-214ENST00000565274 MVB12BQ9H7P6 319 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.34□□□□□ -1.55
CAPN3-214ENST00000565274 ZFYVE1Q9HBF4 777 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 VPS45Q9NRW7 570 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 ATAD3AQ9NVI7 634 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 SMARCAL1Q9NZC9 954 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 IFT80Q9P2H3 777 aaPredicted RBP5.34□□□□□ -1.55
CAPN3-214ENST00000565274 POLLQ9UGP5 575 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 SERPINB13Q9UIV8 391 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 CNOT6Q9ULM6 557 aaKnown RBP5.34□□□□□ -1.55
CAPN3-214ENST00000565274 NFU1Q9UMS0 254 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 PCDHA12Q9UN75 941 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 JAG2Q9Y219 1238 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 TELO2Q9Y4R8 837 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 PCDHB4Q9Y5E5 795 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 GREB1LQ9C091 1923 aaPredicted RBP5.34□□□□□ -1.55
CAPN3-214ENST00000565274 NAV1Q8NEY1 1877 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 ATAD5Q96QE3 1844 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 LRRC37AA6NMS7 1700 aa5.34□□□□□ -1.56
CAPN3-214ENST00000565274 LTBP1Q14766 1721 aa5.34□□□□□ -1.56
CAPN3-214ENST00000565274 QSER1Q2KHR3 1735 aa5.34□□□□□ -1.56
CAPN3-214ENST00000565274 COL2A1P02458 1487 aaPredicted RBP5.33□□□□□ -1.56
CAPN3-214ENST00000565274 TAF1P21675 1872 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 UBE4BO95155 1302 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 FOCADQ5VW36 1801 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 A0A1B0GWJ7 208 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 CCDC162PA2VCL2 907 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 E7EVH7 732 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 GOLGA8MH3BSY2 632 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 CCDC188H7C350 402 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 TRAF5O00463 557 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 GABRDO14764 452 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 NKRFO15226 690 aaKnown RBP eCLIP5.33□□□□□ -1.56
CAPN3-214ENST00000565274 EIF3DO15371 548 aaKnown RBP eCLIP5.33□□□□□ -1.56
CAPN3-214ENST00000565274 RAD51CO43502 376 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 TRAPPC3O43617 180 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 GREM1O60565 184 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 NIPSNAP2O75323 286 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 CLN5O75503 358 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 UFL1O94874 794 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 SERPINB2P05120 415 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 ADRB2P07550 413 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 GSTA1P08263 222 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 FAM153BP0C7A2 387 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 PLA2G4BP0C869 781 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 CD8BP10966 210 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 ACTN1P12814 892 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 NAGAP17050 411 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 ALOX12P18054 663 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 PRKACBP22694 351 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 KELP23276 732 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 ECHS1P30084 290 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 SLC8A1P32418 973 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 SOX5P35711 763 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 TRIM23P36406 574 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 SREBF1P36956 1147 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 PPARGP37231 505 aaPredicted RBP5.33□□□□□ -1.56
CAPN3-214ENST00000565274 SLC1A4P43007 532 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 HNMTP50135 292 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 ZNF157P51786 506 aaPredicted RBP5.33□□□□□ -1.56
CAPN3-214ENST00000565274 ATXN1P54253 815 aaKnown RBP5.33□□□□□ -1.56
CAPN3-214ENST00000565274 JAM2P57087 298 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 DCAF7P61962 342 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 GUCY2DQ02846 1103 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 RNASELQ05823 741 aaKnown RBP5.33□□□□□ -1.56
CAPN3-214ENST00000565274 ITKQ08881 620 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 SLC14A1Q13336 389 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 XRCC4Q13426 336 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 DHX34Q14147 1143 aaKnown RBP5.33□□□□□ -1.56
CAPN3-214ENST00000565274 GIT2Q14161 759 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 DOC2AQ14183 400 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 SPARCL1Q14515 664 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 SLC9A5Q14940 896 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 MOGQ16653 247 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 SKIDA1Q1XH10 827 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 ANO4Q32M45 955 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 CCDC153Q494R4 210 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 FAM153CQ494X1 144 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 PABPC1LQ4VXU2 614 aaKnown RBP5.33□□□□□ -1.56
CAPN3-214ENST00000565274 GRTP1Q5TC63 336 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 KCTD16Q68DU8 428 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 GPR139Q6DWJ6 353 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 TMEM154Q6P9G4 183 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 RUFY4Q6ZNE9 571 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 RHOUQ7L0Q8 258 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 KRT74Q7RTS7 529 aa5.33□□□□□ -1.56
CAPN3-214ENST00000565274 CACNA2D4Q7Z3S7 1137 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms