RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ENPP2Q13822 863 aa8.83□□□□□ -1
UBR1-204ENST00000563239 CDO1Q16878 200 aa8.83□□□□□ -1
UBR1-204ENST00000563239 HSF5Q4G112 596 aaPredicted RBP8.83□□□□□ -1
UBR1-204ENST00000563239 PREPLQ4J6C6 727 aaPredicted RBP8.83□□□□□ -1
UBR1-204ENST00000563239 TDRD12Q587J7 1177 aaKnown RBP8.83□□□□□ -1
UBR1-204ENST00000563239 CXorf57Q6NSI4 855 aaKnown RBP8.83□□□□□ -1
UBR1-204ENST00000563239 PPP1R2P3Q6NXS1 205 aa8.83□□□□□ -1
UBR1-204ENST00000563239 STRADAQ7RTN6 431 aa8.83□□□□□ -1
UBR1-204ENST00000563239 TMC6Q7Z403 805 aa8.83□□□□□ -1
UBR1-204ENST00000563239 ANKS1BQ7Z6G8 1248 aa8.83□□□□□ -1
UBR1-204ENST00000563239 ARFGAP1Q8N6T3 406 aa8.83□□□□□ -1
UBR1-204ENST00000563239 CCDC185Q8N715 623 aa8.83□□□□□ -1
UBR1-204ENST00000563239 ZNF513Q8N8E2 541 aaPredicted RBP8.83□□□□□ -1
UBR1-204ENST00000563239 OR52K2Q8NGK3 314 aa8.83□□□□□ -1
UBR1-204ENST00000563239 CCDC26Q8TAB7 109 aa8.83□□□□□ -1
UBR1-204ENST00000563239 FAM172AQ8WUF8 416 aa8.83□□□□□ -1
UBR1-204ENST00000563239 SORCS1Q8WY21 1168 aa8.83□□□□□ -1
UBR1-204ENST00000563239 C1orf74Q96LT6 269 aa8.83□□□□□ -1
UBR1-204ENST00000563239 MCEEQ96PE7 176 aa8.83□□□□□ -1
UBR1-204ENST00000563239 HHIPQ96QV1 700 aa8.83□□□□□ -1
UBR1-204ENST00000563239 HAPLN3Q96S86 360 aa8.83□□□□□ -1
UBR1-204ENST00000563239 CHP1Q99653 195 aa8.83□□□□□ -1
UBR1-204ENST00000563239 TRIM5Q9C035 493 aa8.83□□□□□ -1
UBR1-204ENST00000563239 SIK2Q9H0K1 926 aa8.83□□□□□ -1
UBR1-204ENST00000563239 ABHD10Q9NUJ1 306 aa8.83□□□□□ -1
UBR1-204ENST00000563239 ABCB8Q9NUT2 735 aa8.83□□□□□ -1
UBR1-204ENST00000563239 ZSCAN32Q9NX65 697 aa8.83□□□□□ -1
UBR1-204ENST00000563239 ELOVL2Q9NXB9 296 aa8.83□□□□□ -1
UBR1-204ENST00000563239 ZNF212Q9UDV6 495 aa8.83□□□□□ -1
UBR1-204ENST00000563239 SLC12A6Q9UHW9 1150 aa8.83□□□□□ -1
UBR1-204ENST00000563239 VANGL2Q9ULK5 521 aa8.83□□□□□ -1
UBR1-204ENST00000563239 R4GN57 208 aa8.83□□□□□ -1
UBR1-204ENST00000563239 ZFHX2Q9C0A1 2572 aaPredicted RBP8.83□□□□□ -1
UBR1-204ENST00000563239 FANCMQ8IYD8 2048 aa8.82□□□□□ -1
UBR1-204ENST00000563239 MUC22E2RYF6 1773 aaPredicted RBP8.82□□□□□ -1
UBR1-204ENST00000563239 IGLV3-10A0A075B6K4 115 aa8.82□□□□□ -1
UBR1-204ENST00000563239 WASH3PC4AMC7 463 aa8.82□□□□□ -1
UBR1-204ENST00000563239 FAM72CH0Y354 149 aa8.82□□□□□ -1
UBR1-204ENST00000563239 HRO43593 1189 aa8.82□□□□□ -1
UBR1-204ENST00000563239 CNTN5O94779 1100 aa8.82□□□□□ -1
UBR1-204ENST00000563239 PABPC1P11940 636 aaKnown RBP8.82□□□□□ -1
UBR1-204ENST00000563239 ADRA1BP35368 520 aa8.82□□□□□ -1
UBR1-204ENST00000563239 IL12RB1P42701 662 aa8.82□□□□□ -1
UBR1-204ENST00000563239 WASP42768 502 aa8.82□□□□□ -1
UBR1-204ENST00000563239 GFPT1Q06210 699 aaPredicted RBP8.82□□□□□ -1
UBR1-204ENST00000563239 MTA1Q13330 715 aa8.82□□□□□ -1
UBR1-204ENST00000563239 CRY1Q16526 586 aa8.82□□□□□ -1
UBR1-204ENST00000563239 PTPRNQ16849 979 aa8.82□□□□□ -1
UBR1-204ENST00000563239 FUT11Q495W5 492 aa8.82□□□□□ -1
UBR1-204ENST00000563239 ALFQ53S48 1182 aa8.82□□□□□ -1
UBR1-204ENST00000563239 FAM72AQ5TYM5 149 aa8.82□□□□□ -1
UBR1-204ENST00000563239 MANEALQ5VSG8 457 aa8.82□□□□□ -1
UBR1-204ENST00000563239 FAM72DQ6L9T8 149 aa8.82□□□□□ -1
UBR1-204ENST00000563239 SND1Q7KZF4 910 aaKnown RBP eCLIP8.82□□□□□ -1
UBR1-204ENST00000563239 CHST9Q7L1S5 443 aa8.82□□□□□ -1
UBR1-204ENST00000563239 RASSF3Q86WH2 238 aa8.82□□□□□ -1
UBR1-204ENST00000563239 FAM72BQ86X60 149 aa8.82□□□□□ -1
UBR1-204ENST00000563239 MFN1Q8IWA4 741 aa8.82□□□□□ -1
UBR1-204ENST00000563239 CCAR2Q8N163 923 aaKnown RBP8.82□□□□□ -1
UBR1-204ENST00000563239 CARNMT1Q8N4J0 409 aa8.82□□□□□ -1
UBR1-204ENST00000563239 TC2NQ8N9U0 490 aa8.82□□□□□ -1
UBR1-204ENST00000563239 TTC17Q96AE7 1141 aa8.82□□□□□ -1
UBR1-204ENST00000563239 ACDQ96AP0 544 aa8.82□□□□□ -1
UBR1-204ENST00000563239 RNF25Q96BH1 459 aaPredicted RBP8.82□□□□□ -1
UBR1-204ENST00000563239 ZNF653Q96CK0 615 aa8.82□□□□□ -1
UBR1-204ENST00000563239 ARHGEF26Q96DR7 871 aa8.82□□□□□ -1
UBR1-204ENST00000563239 ALG14Q96F25 216 aa8.82□□□□□ -1
UBR1-204ENST00000563239 MRFAP1L1Q96HT8 127 aa8.82□□□□□ -1
UBR1-204ENST00000563239 GABRG3Q99928 467 aa8.82□□□□□ -1
UBR1-204ENST00000563239 CNPY3Q9BT09 278 aa8.82□□□□□ -1
UBR1-204ENST00000563239 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.82□□□□□ -1
UBR1-204ENST00000563239 FAM126AQ9BYI3 521 aaPredicted RBP8.82□□□□□ -1
UBR1-204ENST00000563239 THAP2Q9H0W7 228 aa8.82□□□□□ -1
UBR1-204ENST00000563239 IRF2BPLQ9H1B7 796 aa8.82□□□□□ -1
UBR1-204ENST00000563239 PARVAQ9NVD7 372 aa8.82□□□□□ -1
UBR1-204ENST00000563239 TMEM51Q9NW97 253 aa8.82□□□□□ -1
UBR1-204ENST00000563239 CACNA2D2Q9NY47 1150 aa8.82□□□□□ -1
UBR1-204ENST00000563239 THAP10Q9P2Z0 257 aaPredicted RBP8.82□□□□□ -1
UBR1-204ENST00000563239 CNOT8Q9UFF9 292 aaKnown RBP8.82□□□□□ -1
UBR1-204ENST00000563239 EBF1Q9UH73 591 aa8.82□□□□□ -1
UBR1-204ENST00000563239 GGA2Q9UJY4 613 aa8.82□□□□□ -1
UBR1-204ENST00000563239 SLC8A2Q9UPR5 921 aa8.82□□□□□ -1
UBR1-204ENST00000563239 NEU3Q9UQ49 428 aa8.82□□□□□ -1
UBR1-204ENST00000563239 ZNF292O60281 2723 aa8.82□□□□□ -1
UBR1-204ENST00000563239 CHD8Q9HCK8 2581 aa8.81□□□□□ -1
UBR1-204ENST00000563239 A0A1B0GVM2 712 aa8.81□□□□□ -1
UBR1-204ENST00000563239 SSU72P8A0A1W2PR75 194 aa8.81□□□□□ -1
UBR1-204ENST00000563239 TCAF2A6NFQ2 919 aa8.81□□□□□ -1
UBR1-204ENST00000563239 AKR1B15C9JRZ8 316 aaPredicted RBP8.81□□□□□ -1
UBR1-204ENST00000563239 E9PAM4 449 aa8.81□□□□□ -1
UBR1-204ENST00000563239 TIMM44O43615 452 aa8.81□□□□□ -1
UBR1-204ENST00000563239 APBB3O95704 486 aa8.81□□□□□ -1
UBR1-204ENST00000563239 CYP1A2P05177 515 aa8.81□□□□□ -1
UBR1-204ENST00000563239 MYBL1P10243 752 aa8.81□□□□□ -1
UBR1-204ENST00000563239 PRKCHP24723 683 aa8.81□□□□□ -1
UBR1-204ENST00000563239 MZF1P28698 734 aaPredicted RBP8.81□□□□□ -1
UBR1-204ENST00000563239 NTSR1P30989 418 aa8.81□□□□□ -1
UBR1-204ENST00000563239 PLK1P53350 603 aa8.81□□□□□ -1
UBR1-204ENST00000563239 GALCP54803 685 aa8.81□□□□□ -1
UBR1-204ENST00000563239 NRG1Q02297 640 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms