RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 CREB1P16220 341 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 ADRA1DP25100 572 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 ITPKBP27987 946 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 ADD2P35612 726 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 GSTM5P46439 218 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 CDK7P50613 346 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 RRP1P56182 461 aaKnown RBP6.34□□□□□ -1.39
CHD9-205ENST00000562785 CCDC144NLQ6NUI1 221 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 ZNF530Q6P9A1 599 aaPredicted RBP6.34□□□□□ -1.39
CHD9-205ENST00000562785 Q6ZPA2 131 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 TOM1L2Q6ZVM7 507 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 ULK2Q8IYT8 1036 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 LARP4BQ92615 738 aaKnown RBP6.34□□□□□ -1.39
CHD9-205ENST00000562785 RUBCNQ92622 972 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 PDLIM2Q96JY6 352 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 KCNK9Q9NPC2 374 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 FOXJ2Q9P0K8 574 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.34□□□□□ -1.39
CHD9-205ENST00000562785 CCNL1Q9UK58 526 aaPredicted RBP6.34□□□□□ -1.39
CHD9-205ENST00000562785 AMFRQ9UKV5 643 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 C19orf53Q9UNZ5 99 aaPredicted RBP6.34□□□□□ -1.39
CHD9-205ENST00000562785 CNTN6Q9UQ52 1028 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 SLIT2O94813 1529 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 VIRMAQ69YN4 1812 aaKnown RBP6.34□□□□□ -1.4
CHD9-205ENST00000562785 SHANK3Q9BYB0 1731 aa6.33□□□□□ -1.4
CHD9-205ENST00000562785 PAPPAQ13219 1627 aa6.33□□□□□ -1.4
CHD9-205ENST00000562785 SALL3Q9BXA9 1300 aa6.33□□□□□ -1.4
CHD9-205ENST00000562785 HMX3A6NHT5 357 aa6.33□□□□□ -1.4
CHD9-205ENST00000562785 AP4M1O00189 453 aa6.33□□□□□ -1.4
CHD9-205ENST00000562785 PRRG2O14669 202 aa6.33□□□□□ -1.4
CHD9-205ENST00000562785 ORC4O43929 436 aa6.33□□□□□ -1.4
CHD9-205ENST00000562785 CER1O95813 267 aa6.33□□□□□ -1.4
CHD9-205ENST00000562785 TNFRSF1AP19438 455 aa6.33□□□□□ -1.4
CHD9-205ENST00000562785 PAX3P23760 479 aa6.33□□□□□ -1.4
CHD9-205ENST00000562785 CYP2C18P33260 490 aa6.33□□□□□ -1.4
CHD9-205ENST00000562785 PRKAA2P54646 552 aa6.33□□□□□ -1.4
CHD9-205ENST00000562785 ABHD18Q0P651 414 aa6.33□□□□□ -1.4
CHD9-205ENST00000562785 MTHFSDQ2M296 383 aaKnown RBP6.33□□□□□ -1.4
CHD9-205ENST00000562785 FBXO47Q5MNV8 452 aa6.33□□□□□ -1.4
CHD9-205ENST00000562785 CYP26C1Q6V0L0 522 aa6.33□□□□□ -1.4
CHD9-205ENST00000562785 SDCCAG3Q96C92 435 aa6.33□□□□□ -1.4
CHD9-205ENST00000562785 LENG8Q96PV6 779 aaPredicted RBP6.33□□□□□ -1.4
CHD9-205ENST00000562785 THAP7Q9BT49 309 aaPredicted RBP6.33□□□□□ -1.4
CHD9-205ENST00000562785 VPS16Q9H269 839 aa6.33□□□□□ -1.4
CHD9-205ENST00000562785 PGAP2Q9UHJ9 254 aa6.33□□□□□ -1.4
CHD9-205ENST00000562785 LAMB4A4D0S4 1761 aa6.33□□□□□ -1.4
CHD9-205ENST00000562785 DISP2A7MBM2 1401 aa6.33□□□□□ -1.4
CHD9-205ENST00000562785 EFCAB8A8MWE9 144 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 H0Y3Z8 333 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 GCOM1H8Y6P7 765 aaPredicted RBP6.32□□□□□ -1.4
CHD9-205ENST00000562785 CES2O00748 559 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 PPP6R2O75170 966 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 NPSP0C0P6 89 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 ELFN1P0C7U0 828 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 EBLN1P0CF75 366 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 MYCLP12524 364 aaPredicted RBP6.32□□□□□ -1.4
CHD9-205ENST00000562785 INSRRP14616 1297 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 NDUFB7P17568 137 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 ENGP17813 658 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 DIO1P49895 249 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 PSG6Q00889 435 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 DEUP1Q05D60 604 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 TEFQ10587 303 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 DNASE1L3Q13609 305 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 EFR3AQ14156 821 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 ZNF169Q14929 603 aaPredicted RBP6.32□□□□□ -1.4
CHD9-205ENST00000562785 P3H1Q32P28 736 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 TBC1D25Q3MII6 688 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 ADCK5Q3MIX3 580 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 HECTD2Q5U5R9 776 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 DENND2CQ68D51 928 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 ZNF627Q7L945 461 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 P3H2Q8IVL5 708 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 PNPLA1Q8N8W4 532 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 ABHD11Q8NFV4 315 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 OR6Y1Q8NGX8 325 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 SLC22A17Q8WUG5 538 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 UBXN10Q96LJ8 280 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 ZSCAN31Q96LW9 406 aaPredicted RBP6.32□□□□□ -1.4
CHD9-205ENST00000562785 TRAPPC9Q96Q05 1148 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 EIF3CQ99613 913 aaKnown RBP6.32□□□□□ -1.4
CHD9-205ENST00000562785 TWSG1Q9GZX9 223 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 ELAC1Q9H777 363 aaKnown RBP6.32□□□□□ -1.4
CHD9-205ENST00000562785 SNX15Q9NRS6 342 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 ASAP1Q9ULH1 1129 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 ADAMTS5Q9UNA0 930 aa6.32□□□□□ -1.4
CHD9-205ENST00000562785 UBE2J1Q9Y385 318 aaPredicted RBP6.32□□□□□ -1.4
CHD9-205ENST00000562785 LOC105369274A0A096LPK9 316 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 LOC102723532A0A0G2JNH3 316 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 KIF28PB7ZC32 967 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 B9A039 149 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 LARGE1O95461 756 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 HOXB7P09629 217 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 ZNF853P0CG23 659 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 KRT4P19013 534 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 MMP8P22894 467 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 EEFSECP57772 596 aaKnown RBP6.31□□□□□ -1.4
CHD9-205ENST00000562785 TXNL4AP83876 142 aaKnown RBP6.31□□□□□ -1.4
CHD9-205ENST00000562785 POU5F1BQ06416 359 aa6.31□□□□□ -1.4
CHD9-205ENST00000562785 SF3A3Q12874 501 aaKnown RBP eCLIP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms