RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 ZNF776Q68DI1 518 aaPredicted RBP17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 MMS22LQ6ZRQ5 1243 aa17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 ZNF557Q8N988 423 aaPredicted RBP17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 EHBP1Q8NDI1 1231 aa17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 NELFBQ8WX92 580 aa17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 SERPINB11Q96P15 392 aa17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 SUN2Q9UH99 717 aa17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 XPO7Q9UIA9 1087 aaKnown RBP17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 CNTN6Q9UQ52 1028 aa17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 TLR6Q9Y2C9 796 aa17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 ANKRD6Q9Y2G4 727 aa17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 FAM208BQ5VWN6 2430 aa17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 PTPRBP23467 1997 aa17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 PLXNA2O75051 1894 aa17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 SIN3BO75182 1162 aa17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 HOXB3P14651 431 aaPredicted RBP17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 CD27P26842 260 aa17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 PPP1R2P41236 205 aa17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 CETN1Q12798 172 aa17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 NNTQ13423 1086 aa17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 HNRNPA1L2Q32P51 320 aaKnown RBP17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 MS4A13Q5J8X5 152 aa17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 SYPL2Q5VXT5 272 aa17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 CCNI2Q6ZMN8 369 aaPredicted RBP17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 TAC4Q86UU9 113 aa17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 TRIM59Q8IWR1 403 aa17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 ELOA2Q8IYF1 753 aaPredicted RBP17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 CFAP52Q8N1V2 620 aa17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 CARNMT1Q8N4J0 409 aa17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 PABPC3Q9H361 631 aaKnown RBP17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 SGK2Q9HBY8 427 aa17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 ST7Q9NRC1 585 aa17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 KIAA1522Q9P206 1035 aaPredicted RBP17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 SERGEFQ9UGK8 458 aa17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 CTNND2Q9UQB3 1225 aa17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 NYNRINQ9P2P1 1898 aaKnown RBP17.31■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 TYW5A2RUC4 315 aaKnown RBP17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 KCNK3O14649 394 aa17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 DKK1O94907 266 aa17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 MOCS2O96007 188 aaPredicted RBP17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 ASLP04424 464 aa17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 ATXN1LP0C7T5 689 aaKnown RBP17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 CTSOP43234 321 aaPredicted RBP17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 ST8SIA6P61647 398 aa17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 KCNH2Q12809 1159 aa17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 CDH18Q13634 790 aa17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 ARID5BQ14865 1188 aa17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 TEAD4Q15561 434 aa17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 DCAF6Q58WW2 860 aa17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 PITRM1Q5JRX3 1037 aa17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 DENND1BQ6P3S1 775 aa17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 FOXR2Q6PJQ5 311 aa17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 USP30Q70CQ3 517 aa17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 DHX40Q8IX18 779 aaKnown RBP17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 RHBDD1Q8TEB9 315 aa17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 FAM149B1Q96BN6 582 aa17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 DDX50Q9BQ39 737 aaKnown RBP17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 INTS2Q9H0H0 1204 aaKnown RBP17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 CYTH4Q9UIA0 394 aa17.3■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 ZFYVE26Q68DK2 2539 aa17.29■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 H0Y8X5 98 aa17.29■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 PAPSS1O43252 624 aaPredicted RBP17.29■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 LUC7L3O95232 432 aaKnown RBP17.29■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 KRT5P13647 590 aa17.29■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 MARSP56192 900 aaKnown RBP17.29■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 MORC3Q14149 939 aa17.29■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 C9orf64Q5T6V5 341 aa17.29■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 KIAA0895LQ68EN5 471 aa17.29■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 BEND5Q7L4P6 421 aa17.29■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 KDM1BQ8NB78 822 aa17.29■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 IGSF8Q969P0 613 aa17.29■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 SLC4A5Q9BY07 1137 aa17.29■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 ACP6Q9NPH0 428 aa17.29■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 FBXL12Q9NXK8 326 aa17.29■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 SCML1Q9UN30 329 aa17.29■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 LHX6Q9UPM6 363 aa17.29■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 ERVW-1Q9UQF0 538 aa17.29■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 TP53BP1Q12888 1972 aaPredicted RBP17.29■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 A0A1W2PP55 124 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 BICDL2A1A5D9 508 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 FAM47DPA6NHR8 397 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 TTC34A8MYJ7 566 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 C10orf142B7Z368 130 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 E5RJQ4 531 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 BIN1O00499 593 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 MID1O15344 667 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 SART1O43290 800 aaKnown RBP17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 IGLV3-25P01717 112 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 AFPP02771 609 aaKnown RBP17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 CTSKP43235 329 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 GALCP54803 685 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 STX17P56962 302 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 PITX1P78337 314 aaPredicted RBP17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 NUCB2P80303 420 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 CST6Q15828 149 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 RAP1GAP2Q684P5 730 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 LRSAM1Q6UWE0 723 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 MMAAQ8IVH4 418 aaKnown RBP17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 APCDD1Q8J025 514 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 LGI2Q8N0V4 545 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms