RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 MUC6Q6W4X9 2439 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 PLXND1Q9Y4D7 1925 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 CACNA1HO95180 2353 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 A0A0A6YYK5 440 aaPredicted RBP13.86□□□□□ -0.19
CDH1-204ENST00000562118 BTNL10A8MVZ5 291 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 PRRT4C9JH25 899 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 APODP05090 189 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 DCNP07585 359 aaKnown RBP13.86□□□□□ -0.19
CDH1-204ENST00000562118 HNRNPLP14866 589 aaKnown RBP eCLIP13.86□□□□□ -0.19
CDH1-204ENST00000562118 PSMA2P25787 234 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 HTR7P34969 479 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 IRAK1P51617 712 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 PLK1P53350 603 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 SLC25A11Q02978 314 aaKnown RBP13.86□□□□□ -0.19
CDH1-204ENST00000562118 EIF4HQ15056 248 aaKnown RBP13.86□□□□□ -0.19
CDH1-204ENST00000562118 CDO1Q16878 200 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 RABGAP1LQ5R372 815 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 TMEM215Q68D42 235 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 ANKS1BQ7Z6G8 1248 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 NLRP14Q86W24 1093 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 RHOT2Q8IXI1 618 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 MAML2Q8IZL2 1156 aaPredicted RBP13.86□□□□□ -0.19
CDH1-204ENST00000562118 LGI2Q8N0V4 545 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 PIAS4Q8N2W9 510 aaPredicted RBP13.86□□□□□ -0.19
CDH1-204ENST00000562118 NAT16Q8N8M0 369 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 CCDC26Q8TAB7 109 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 ZNF564Q8TBZ8 553 aaPredicted RBP13.86□□□□□ -0.19
CDH1-204ENST00000562118 FAM71BQ8TC56 605 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 USP33Q8TEY7 942 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 RFFLQ8WZ73 363 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 NELL1Q92832 810 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 ALG14Q96F25 216 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 PDLIM2Q96JY6 352 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 BAG1Q99933 345 aaPredicted RBP13.86□□□□□ -0.19
CDH1-204ENST00000562118 LMAN1LQ9HAT1 526 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 CD248Q9HCU0 757 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 RBM12Q9NTZ6 932 aaKnown RBP13.86□□□□□ -0.19
CDH1-204ENST00000562118 MYO1AQ9UBC5 1043 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 ANAPC7Q9UJX3 599 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 OR51B4Q9Y5P0 310 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 ATG2BQ96BY7 2078 aa13.86□□□□□ -0.19
CDH1-204ENST00000562118 EML5Q05BV3 1969 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 USP34Q70CQ2 3546 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 E9PAM4 449 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 PJA2O43164 708 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 TSPAN3O60637 253 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 TBL1XO60907 577 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 CLDN11O75508 207 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 MIPP30301 263 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 HOXA6P31267 233 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 L1CAMP32004 1257 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 CYLC1P35663 651 aaPredicted RBP13.85□□□□□ -0.19
CDH1-204ENST00000562118 MRE11P49959 708 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 VASPP50552 380 aaPredicted RBP13.85□□□□□ -0.19
CDH1-204ENST00000562118 CDH4P55283 916 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 MRPS21P82921 87 aaKnown RBP13.85□□□□□ -0.19
CDH1-204ENST00000562118 GEN1Q17RS7 908 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 ARL13BQ3SXY8 428 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 PKN3Q6P5Z2 889 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 Q6ZS52 159 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 SLFN11Q7Z7L1 901 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 ADIPOR2Q86V24 386 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 CCAR2Q8N163 923 aaKnown RBP13.85□□□□□ -0.19
CDH1-204ENST00000562118 SPEM1Q8N4L4 309 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 DTWD2Q8NBA8 298 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 SPC24Q8NBT2 197 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 WFIKKN2Q8TEU8 576 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 RNF34Q969K3 372 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 TTC17Q96AE7 1141 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 OSGEPQ9NPF4 335 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 OR12D3Q9UGF7 316 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 IP6K2Q9UHH9 426 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 INTS6Q9UL03 887 aaKnown RBP13.85□□□□□ -0.19
CDH1-204ENST00000562118 VANGL2Q9ULK5 521 aa13.85□□□□□ -0.19
CDH1-204ENST00000562118 TYW5A2RUC4 315 aaKnown RBP13.84□□□□□ -0.19
CDH1-204ENST00000562118 ANTXRLA6NF34 631 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 WASH4PA8MWX3 477 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 FAM72CH0Y354 149 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 NPC1O15118 1278 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 GALR2O43603 387 aaPredicted RBP13.84□□□□□ -0.19
CDH1-204ENST00000562118 RNF40O75150 1001 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 PROSCO94903 275 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 IL1R2P27930 398 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 ARHGAP25P42331 645 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 KDSRQ06136 332 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 LMAN2Q12907 356 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 MTAPQ13126 283 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 SLC12A1Q13621 1099 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 DPYSL2Q16555 572 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 ALFQ53S48 1182 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 FSCBQ5H9T9 825 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 FAM72AQ5TYM5 149 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 FAM72DQ6L9T8 149 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 SETD3Q86TU7 594 aaPredicted RBP13.84□□□□□ -0.19
CDH1-204ENST00000562118 FAM72BQ86X60 149 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 MFN1Q8IWA4 741 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 AHI1Q8N157 1196 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 CFAP52Q8N1V2 620 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 IL17RCQ8NAC3 791 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 SLC35G2Q8TBE7 412 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms