RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 SLC9A3R1O14745 358 aaPredicted RBP13.05□□□□□ -0.32
CMTM4-203ENST00000561680 DCLK1O15075 740 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 ECI2O75521 394 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 AMPD1P23109 780 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 EPHB2P29323 1055 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 SGSHP51688 502 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 VCPP55072 806 aaKnown RBP13.05□□□□□ -0.32
CMTM4-203ENST00000561680 ADCY2Q08462 1091 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 FCHO2Q0JRZ9 810 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 KLF1Q13351 362 aaPredicted RBP13.05□□□□□ -0.32
CMTM4-203ENST00000561680 HTR4Q13639 388 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 TUBB2AQ13885 445 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 TFDP2Q14188 446 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 LLGL1Q15334 1064 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 PUS10Q3MIT2 529 aaKnown RBP13.05□□□□□ -0.32
CMTM4-203ENST00000561680 DNTTIP2Q5QJE6 756 aaKnown RBP13.05□□□□□ -0.32
CMTM4-203ENST00000561680 RABGAP1LQ5R372 815 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 TTC39BQ5VTQ0 682 aaPredicted RBP13.05□□□□□ -0.32
CMTM4-203ENST00000561680 KAZNQ674X7 775 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 SLC9A4Q6AI14 798 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 PTCRAQ6ISU1 281 aaPredicted RBP13.05□□□□□ -0.32
CMTM4-203ENST00000561680 PARM1Q6UWI2 310 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 BBS12Q6ZW61 710 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 NLRP14Q86W24 1093 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 RFX6Q8HWS3 928 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 CREG2Q8IUH2 290 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 MFSD6LQ8IWD5 586 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 HJURPQ8NCD3 748 aaPredicted RBP13.05□□□□□ -0.32
CMTM4-203ENST00000561680 OSCP1Q8WVF1 389 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 ASIC4Q96FT7 647 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 MS4A14Q96JA4 679 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 RPRD1AQ96P16 312 aaPredicted RBP13.05□□□□□ -0.32
CMTM4-203ENST00000561680 TUBB2BQ9BVA1 445 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 PHF7Q9BWX1 381 aaPredicted RBP13.05□□□□□ -0.32
CMTM4-203ENST00000561680 ZYG11BQ9C0D3 744 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 CATSPERBQ9H7T0 1116 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 ZNF212Q9UDV6 495 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 CDC23Q9UJX2 597 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 NR2E1Q9Y466 385 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 MRFAP1Q9Y605 127 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 WNT6Q9Y6F9 365 aa13.05□□□□□ -0.32
CMTM4-203ENST00000561680 TCRBV7S2A1N4TA0A589 114 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 C2CD4DB7Z1M9 353 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 ANHXE9PGG2 379 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 TRDMT1O14717 391 aaKnown RBP13.04□□□□□ -0.32
CMTM4-203ENST00000561680 APOL1O14791 398 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 CST8O60676 142 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 TJP3O95049 919 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 FGGP02679 453 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 RHOQP17081 205 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 ERCC2P18074 760 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 SP100P23497 879 aaPredicted RBP13.04□□□□□ -0.32
CMTM4-203ENST00000561680 IFNAR2P48551 515 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 RPS24P62847 133 aaKnown RBP13.04□□□□□ -0.32
CMTM4-203ENST00000561680 EML3Q32P44 896 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 ALFQ53S48 1182 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 RNF43Q68DV7 783 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 NCBP2-AS2Q69YL0 99 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 RWDD4Q6NW29 188 aaKnown RBP13.04□□□□□ -0.32
CMTM4-203ENST00000561680 CHST9Q7L1S5 443 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 CIR1Q86X95 450 aaPredicted RBP13.04□□□□□ -0.32
CMTM4-203ENST00000561680 PLD5Q8N7P1 536 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.04□□□□□ -0.32
CMTM4-203ENST00000561680 DEPDC1BQ8WUY9 529 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 FGF14Q92915 247 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 CAPZA3Q96KX2 299 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 NAP1L3Q99457 506 aaPredicted RBP13.04□□□□□ -0.32
CMTM4-203ENST00000561680 KXD1Q9BQD3 176 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 HEMGNQ9BXL5 484 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 MAK16Q9BXY0 300 aaKnown RBP13.04□□□□□ -0.32
CMTM4-203ENST00000561680 PLA2G2FQ9BZM2 168 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 LINC00597Q9H2U6 94 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 RETREG1Q9H6L5 497 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 ETNK2Q9NVF9 386 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 TMEM248Q9NWD8 314 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 DUS2Q9NX74 493 aaKnown RBP13.04□□□□□ -0.32
CMTM4-203ENST00000561680 SMARCAL1Q9NZC9 954 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 MPP6Q9NZW5 540 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 RNF14Q9UBS8 474 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 FAM50BQ9Y247 325 aa13.04□□□□□ -0.32
CMTM4-203ENST00000561680 MUC22E2RYF6 1773 aaPredicted RBP13.04□□□□□ -0.32
CMTM4-203ENST00000561680 A0A1B0GVM2 712 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 TYW5A2RUC4 315 aaKnown RBP13.03□□□□□ -0.32
CMTM4-203ENST00000561680 TCAF2A6NFQ2 919 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 PDE2AO00408 941 aaPredicted RBP13.03□□□□□ -0.32
CMTM4-203ENST00000561680 DAPK3O43293 454 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 TSPAN3O60637 253 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 CNTN5O94779 1100 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 ZFXP17010 805 aaPredicted RBP13.03□□□□□ -0.32
CMTM4-203ENST00000561680 PSMC3P17980 439 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 TGM2P21980 687 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 CDH4P55283 916 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 TFF2Q03403 129 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 PAFAH1B3Q15102 231 aaKnown RBP13.03□□□□□ -0.32
CMTM4-203ENST00000561680 SIX1Q15475 284 aaPredicted RBP13.03□□□□□ -0.32
CMTM4-203ENST00000561680 WHAMMP3Q1A5X7 153 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 MPPE1Q53F39 396 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 MPP7Q5T2T1 576 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 TMCO3Q6UWJ1 677 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 ZNF572Q7Z3I7 529 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms