RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	C18orf8	Q96DM3	657 aa		4.54	□□□□□ -1.68
LRRC28-222	ENST00000561431	PGBD1	Q96JS3	809 aa		4.54	□□□□□ -1.68
LRRC28-222	ENST00000561431	PRPF18	Q99633	342 aa	Known RBP	4.54	□□□□□ -1.68
LRRC28-222	ENST00000561431	C17orf80	Q9BSJ5	609 aa		4.54	□□□□□ -1.68
LRRC28-222	ENST00000561431	MLST8	Q9BVC4	326 aa		4.54	□□□□□ -1.68
LRRC28-222	ENST00000561431	TRIM5	Q9C035	493 aa		4.54	□□□□□ -1.68
LRRC28-222	ENST00000561431	OBP2B	Q9NPH6	170 aa		4.54	□□□□□ -1.68
LRRC28-222	ENST00000561431	SSX2IP	Q9Y2D8	614 aa		4.54	□□□□□ -1.68
LRRC28-222	ENST00000561431	USP16	Q9Y5T5	823 aa		4.54	□□□□□ -1.68
LRRC28-222	ENST00000561431	ADCY9	O60503	1353 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	PIPSL	A2A3N6	862 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	GOLGA6L3	A6NEY3	463 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431		K7ENM7	598 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	SLC16A3	O15427	465 aa	Known RBP	4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	CD3EAP	O15446	510 aa	Known RBP	4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	ZSCAN9	O15535	394 aa	Predicted RBP	4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	RHOBTB3	O94955	611 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	CAMTA2	O94983	1202 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	CSTB	P04080	98 aa	Known RBP	4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	RHO	P08100	348 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	HKR1	P10072	659 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	NTSR1	P30989	418 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	ANP32A	P39687	249 aa	Known RBP	4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	AVPR1B	P47901	424 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	RXRG	P48443	463 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	CCT5	P48643	541 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	EIF4A1	P60842	406 aa	Known RBP	4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	BLOC1S1	P78537	153 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	SP2	Q02086	613 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	BIRC3	Q13489	604 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	PFKFB4	Q16877	469 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	P3H1	Q32P28	736 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	KRTAP15-1	Q3LI76	137 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	ARHGAP15	Q53QZ3	475 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	PLAC9	Q5JTB6	97 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	TREML2	Q5T2D2	321 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	KAZN	Q674X7	775 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	VWA1	Q6PCB0	445 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	CLEC9A	Q6UXN8	241 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	MRGPRE	Q86SM8	312 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	ABRA	Q8N0Z2	381 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	LRRC71	Q8N4P6	559 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	MYCT1	Q8N699	235 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	ARL6IP6	Q8N6S5	226 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	C11orf44	Q8N8P7	122 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	ABHD5	Q8WTS1	349 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	R3HDM4	Q96D70	268 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	TEX13A	Q9BXU3	409 aa	Predicted RBP	4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	PNN	Q9H307	717 aa	Known RBP	4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	TSPY26P	Q9H489	355 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	NECTIN3	Q9NQS3	549 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	SH3GLB2	Q9NR46	395 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	KCTD5	Q9NXV2	234 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	LRIT1	Q9P2V4	623 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	MAFF	Q9ULX9	164 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	RRP7A	Q9Y3A4	280 aa	Known RBP	4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	TTLL3	Q9Y4R7	772 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	SNX14	Q9Y5W7	946 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	DGKB	Q9Y6T7	804 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	TNRC6C	Q9HCJ0	1690 aa	Known RBP	4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431	ARFGEF1	Q9Y6D6	1849 aa		4.53	□□□□□ -1.68
LRRC28-222	ENST00000561431		A0A0G2JLW4	131 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431		A1L4Q6	167 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431		A6NCN8	305 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	TRIM64C	A6NLI5	447 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	USP1	O94782	785 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	NXPH3	O95157	252 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	VNN1	O95497	513 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	VIP	P01282	170 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	FES	P07332	822 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	CSF1R	P07333	972 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	NR2F6	P10588	404 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	EGR2	P11161	476 aa	Predicted RBP	4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	DPEP1	P16444	411 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	EGR1	P18146	543 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	TNFAIP3	P21580	790 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	GABRB3	P28472	473 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	OAS2	P29728	719 aa	Known RBP	4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	UQCRC1	P31930	480 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	LIPA	P38571	399 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	SSR1	P43307	286 aa	Known RBP	4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	RENBP	P51606	427 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	CLCN2	P51788	898 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	ZNF131	P52739	623 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	BCAT1	P54687	386 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	RIPK4	P57078	832 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	MRPS35	P82673	323 aa	Known RBP	4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	SPARCL1	Q14515	664 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	WDR43	Q15061	677 aa	Known RBP eCLIP	4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	GPR162	Q16538	588 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	MAPKAPK3	Q16644	382 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	LY6K	Q17RY6	165 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	ZACN	Q401N2	412 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	PRR16	Q569H4	304 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	CCDC158	Q5M9N0	1113 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	ZNF618	Q5T7W0	954 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	MANEAL	Q5VSG8	457 aa		4.52	□□□□□ -1.69
LRRC28-222	ENST00000561431	TBC1D9B	Q66K14	1250 aa		4.52	□□□□□ -1.69

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