RNA–Protein interactions for RNA: ENST00000561415.1

IRF9-215, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 1,769 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-215ENST00000561415 LRRC1Q9BTT6 524 aa20.13■□□□□ 0.81
IRF9-215ENST00000561415 ZYG11BQ9C0D3 744 aa20.13■□□□□ 0.81
IRF9-215ENST00000561415 SMG9Q9H0W8 520 aaKnown RBP20.13■□□□□ 0.81
IRF9-215ENST00000561415 ADAM7Q9H2U9 754 aa20.13■□□□□ 0.81
IRF9-215ENST00000561415 TDP1Q9NUW8 608 aa20.13■□□□□ 0.81
IRF9-215ENST00000561415 DTLQ9NZJ0 730 aa20.13■□□□□ 0.81
IRF9-215ENST00000561415 CCL26Q9Y258 94 aa20.13■□□□□ 0.81
IRF9-215ENST00000561415 BRWD1Q9NSI6 2320 aa20.12■□□□□ 0.81
IRF9-215ENST00000561415 DRGXA6NNA5 263 aa20.12■□□□□ 0.81
IRF9-215ENST00000561415 LEFTY2O00292 366 aa20.12■□□□□ 0.81
IRF9-215ENST00000561415 MCF2LO15068 1137 aa20.12■□□□□ 0.81
IRF9-215ENST00000561415 RAD51CO43502 376 aa20.12■□□□□ 0.81
IRF9-215ENST00000561415 SERPINB6P35237 376 aa20.12■□□□□ 0.81
IRF9-215ENST00000561415 KCNJ1P48048 391 aa20.12■□□□□ 0.81
IRF9-215ENST00000561415 SLC10A2Q12908 348 aaPredicted RBP20.12■□□□□ 0.81
IRF9-215ENST00000561415 DHX34Q14147 1143 aaKnown RBP20.12■□□□□ 0.81
IRF9-215ENST00000561415 POTEHQ6S545 545 aa20.12■□□□□ 0.81
IRF9-215ENST00000561415 MAATS1Q7Z4T9 603 aa20.12■□□□□ 0.81
IRF9-215ENST00000561415 CCDC105Q8IYK2 499 aa20.12■□□□□ 0.81
IRF9-215ENST00000561415 NPWQ8N729 165 aa20.12■□□□□ 0.81
IRF9-215ENST00000561415 RTL3Q8N8U3 475 aaKnown RBP20.12■□□□□ 0.81
IRF9-215ENST00000561415 CCDC26Q8TAB7 109 aa20.12■□□□□ 0.81
IRF9-215ENST00000561415 SH3RF2Q8TEC5 729 aa20.12■□□□□ 0.81
IRF9-215ENST00000561415 IGSF8Q969P0 613 aa20.12■□□□□ 0.81
IRF9-215ENST00000561415 LRCH3Q96II8 777 aa20.12■□□□□ 0.81
IRF9-215ENST00000561415 ZSWIM3Q96MP5 696 aa20.12■□□□□ 0.81
IRF9-215ENST00000561415 RPRD1AQ96P16 312 aaPredicted RBP20.12■□□□□ 0.81
IRF9-215ENST00000561415 DDX50Q9BQ39 737 aaKnown RBP20.12■□□□□ 0.81
IRF9-215ENST00000561415 MPP6Q9NZW5 540 aa20.12■□□□□ 0.81
IRF9-215ENST00000561415 SH3BP1Q9Y3L3 701 aa20.12■□□□□ 0.81
IRF9-215ENST00000561415 WASH4PA8MWX3 477 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 PRAMEF12O95522 483 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 RHOQP17081 205 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 FSHRP23945 695 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 WEE1P30291 646 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 IRAK1P51617 712 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 TERF1P54274 439 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 EIF3EP60228 445 aaKnown RBP20.11■□□□□ 0.81
IRF9-215ENST00000561415 DR1Q01658 176 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 CBX2Q14781 532 aaPredicted RBP20.11■□□□□ 0.81
IRF9-215ENST00000561415 CCDC70Q6NSX1 233 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 RFWD3Q6PCD5 774 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 BZW1Q7L1Q6 419 aaKnown RBP20.11■□□□□ 0.81
IRF9-215ENST00000561415 NLRP14Q86W24 1093 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 NPAS3Q8IXF0 933 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 FAM217AQ8IXS0 508 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 LGI2Q8N0V4 545 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 ATL2Q8NHH9 583 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 MYEOVQ96EZ4 313 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 OLFM3Q96PB7 478 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 CLDND1Q9NY35 253 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 CDH22Q9UJ99 828 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 ZNF510Q9Y2H8 683 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 NUP205Q92621 2012 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 MAP3K6O95382 1288 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 ITGAVP06756 1048 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 RHOXF2BP0C7M4 288 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 RBP3P10745 1247 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 TCF3P15923 654 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 IGFBP4P22692 258 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 MRPS25P82663 173 aaKnown RBP20.11■□□□□ 0.81
IRF9-215ENST00000561415 DLX2Q07687 328 aaPredicted RBP20.11■□□□□ 0.81
IRF9-215ENST00000561415 GRK7Q8WTQ7 553 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 PRICKLE1Q96MT3 831 aaPredicted RBP20.11■□□□□ 0.81
IRF9-215ENST00000561415 RHOXF2Q9BQY4 288 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 S1PR5Q9H228 398 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 TMEM248Q9NWD8 314 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 FEZ2Q9UHY8 353 aaPredicted RBP20.11■□□□□ 0.81
IRF9-215ENST00000561415 DRG1Q9Y295 367 aaKnown RBP20.11■□□□□ 0.81
IRF9-215ENST00000561415 RAD54BQ9Y620 910 aa20.11■□□□□ 0.81
IRF9-215ENST00000561415 SPTBN5Q9NRC6 3674 aaKnown RBP20.1■□□□□ 0.81
IRF9-215ENST00000561415 E2F8A0AVK6 867 aa20.1■□□□□ 0.81
IRF9-215ENST00000561415 TTI1O43156 1089 aa20.1■□□□□ 0.81
IRF9-215ENST00000561415 PTGIRP43119 386 aa20.1■□□□□ 0.81
IRF9-215ENST00000561415 XRCC4Q13426 336 aa20.1■□□□□ 0.81
IRF9-215ENST00000561415 NAA30Q147X3 362 aaPredicted RBP20.1■□□□□ 0.81
IRF9-215ENST00000561415 ALFQ53S48 1182 aa20.1■□□□□ 0.81
IRF9-215ENST00000561415 RABGAP1LQ5R372 815 aa20.1■□□□□ 0.81
IRF9-215ENST00000561415 CES5AQ6NT32 575 aa20.1■□□□□ 0.81
IRF9-215ENST00000561415 ZC3H18Q86VM9 953 aaKnown RBP20.1■□□□□ 0.81
IRF9-215ENST00000561415 ARID3BQ8IVW6 561 aaPredicted RBP20.1■□□□□ 0.81
IRF9-215ENST00000561415 LZTR1Q8N653 840 aa20.1■□□□□ 0.81
IRF9-215ENST00000561415 ZSCAN18Q8TBC5 510 aaPredicted RBP20.1■□□□□ 0.81
IRF9-215ENST00000561415 CCDC114Q96M63 670 aa20.1■□□□□ 0.81
IRF9-215ENST00000561415 FAM161BQ96MY7 647 aa20.1■□□□□ 0.81
IRF9-215ENST00000561415 KLC2Q9H0B6 622 aa20.1■□□□□ 0.81
IRF9-215ENST00000561415 DONSONQ9NYP3 566 aa20.1■□□□□ 0.81
IRF9-215ENST00000561415 ZNF212Q9UDV6 495 aa20.1■□□□□ 0.81
IRF9-215ENST00000561415 ZNF148Q9UQR1 794 aa20.1■□□□□ 0.81
IRF9-215ENST00000561415 GFRA2O00451 464 aa20.09■□□□□ 0.81
IRF9-215ENST00000561415 SCAMP3O14828 347 aaKnown RBP20.09■□□□□ 0.81
IRF9-215ENST00000561415 CNTN5O94779 1100 aa20.09■□□□□ 0.81
IRF9-215ENST00000561415 ECEL1O95672 775 aa20.09■□□□□ 0.81
IRF9-215ENST00000561415 LTBRP36941 435 aa20.09■□□□□ 0.81
IRF9-215ENST00000561415 LMNB2Q03252 620 aa20.09■□□□□ 0.81
IRF9-215ENST00000561415 USP4Q13107 963 aa20.09■□□□□ 0.81
IRF9-215ENST00000561415 TTC16Q8NEE8 873 aa20.09■□□□□ 0.81
IRF9-215ENST00000561415 RIN3Q8TB24 985 aa20.09■□□□□ 0.81
IRF9-215ENST00000561415 FGF13Q92913 245 aa20.09■□□□□ 0.81
IRF9-215ENST00000561415 PABPC5Q96DU9 382 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms