RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	ASPSCR1	Q9BZE9	553 aa		7.71	□□□□□ -1.18
MARK3-223	ENST00000561071	HAPLN2	Q9GZV7	340 aa		7.71	□□□□□ -1.18
MARK3-223	ENST00000561071	BHMT2	Q9H2M3	363 aa		7.71	□□□□□ -1.18
MARK3-223	ENST00000561071	SFXN1	Q9H9B4	322 aa		7.71	□□□□□ -1.18
MARK3-223	ENST00000561071	PRMT7	Q9NVM4	692 aa	Predicted RBP	7.71	□□□□□ -1.18
MARK3-223	ENST00000561071	DDX56	Q9NY93	547 aa	Known RBP	7.71	□□□□□ -1.18
MARK3-223	ENST00000561071	SAE1	Q9UBE0	346 aa	Predicted RBP	7.71	□□□□□ -1.18
MARK3-223	ENST00000561071	LRWD1	Q9UFC0	647 aa		7.71	□□□□□ -1.18
MARK3-223	ENST00000561071	DNAI1	Q9UI46	699 aa		7.71	□□□□□ -1.18
MARK3-223	ENST00000561071	SORCS3	Q9UPU3	1222 aa		7.71	□□□□□ -1.18
MARK3-223	ENST00000561071	GDA	Q9Y2T3	454 aa		7.71	□□□□□ -1.18
MARK3-223	ENST00000561071	PCDHB6	Q9Y5E3	794 aa		7.71	□□□□□ -1.18
MARK3-223	ENST00000561071	DMD	P11532	3685 aa		7.71	□□□□□ -1.18
MARK3-223	ENST00000561071		E9PMD0	336 aa		7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	GABRD	O14764	452 aa		7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	ADAM12	O43184	909 aa		7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	RECQL4	O94761	1208 aa		7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	PRKCB	P05771	671 aa		7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	ENPP1	P22413	925 aa		7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	KLF1	Q13351	362 aa	Predicted RBP	7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	USP10	Q14694	798 aa	Known RBP	7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	PCOLCE	Q15113	449 aa		7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	ZRSR1	Q15695	479 aa	Known RBP	7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	MAPK6	Q16659	721 aa		7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	UGT8	Q16880	541 aa		7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	USP41	Q3LFD5	358 aa		7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	GLRA4	Q5JXX5	417 aa		7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	CCDC149	Q6ZUS6	474 aa		7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	KCNK18	Q7Z418	384 aa		7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	CEP57	Q86XR8	500 aa		7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	KBTBD2	Q8IY47	623 aa		7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	HACE1	Q8IYU2	909 aa		7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	ERMN	Q8TAM6	284 aa		7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	ZNF707	Q96C28	371 aa	Predicted RBP	7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	QRSL1	Q9H0R6	528 aa	Known RBP	7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	KCTD10	Q9H3F6	313 aa		7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	DDX19A	Q9NUU7	478 aa	Known RBP	7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	ADAM28	Q9UKQ2	775 aa		7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	NUMBL	Q9Y6R0	609 aa		7.7	□□□□□ -1.18
MARK3-223	ENST00000561071	PLXNA3	P51805	1871 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071		A0A0A6YYK5	440 aa	Predicted RBP	7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	OTOL1	A6NHN0	477 aa	Predicted RBP	7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	CCDC169	A6NNP5	214 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071		I3L4J1	428 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	ACKR2	O00590	384 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	NARS	O43776	548 aa	Known RBP	7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	EIF5B	O60841	1220 aa	Known RBP	7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	GLUD1	P00367	558 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	MT-CO1	P00395	513 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	U2AF2	P26368	475 aa	Known RBP eCLIP	7.69	□□□□□ -1.18	1e-7	■■■□□ 18
MARK3-223	ENST00000561071	NAMPT	P43490	491 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	LGALS4	P56470	323 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	OSTN	P61366	133 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	HMGN5	P82970	282 aa	Known RBP	7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	GRIK3	Q13003	919 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	NAB2	Q15742	525 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	FAM187B	Q17R55	369 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	INAVA	Q3KP66	663 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	ATF7IP2	Q5U623	682 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	FAM171A1	Q5VUB5	890 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	LILRA6	Q6PI73	481 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	SLC41A1	Q8IVJ1	513 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	UBALD2	Q8IYN6	164 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	DAW1	Q8N136	415 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	TMEM105	Q8N8V8	129 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	SMG7	Q92540	1137 aa	Known RBP	7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	MYADM	Q96S97	322 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	PLIN2	Q99541	437 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	SOX7	Q9BT81	388 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	MENT	Q9BUN1	341 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	C2orf40	Q9H1Z8	148 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	KCNH6	Q9H252	994 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	CCM2L	Q9NUG4	571 aa	Predicted RBP	7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	POLR3B	Q9NW08	1133 aa	Predicted RBP	7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	STK39	Q9UEW8	545 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	PRSS50	Q9UI38	385 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	NOL7	Q9UMY1	257 aa	Known RBP	7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	SSX2IP	Q9Y2D8	614 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	DUSP10	Q9Y6W6	482 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	USP34	Q70CQ2	3546 aa		7.69	□□□□□ -1.18
MARK3-223	ENST00000561071	TDRD15	B5MCY1	1934 aa	Known RBP	7.68	□□□□□ -1.18
MARK3-223	ENST00000561071	C2orf16	Q68DN1	1984 aa		7.68	□□□□□ -1.18
MARK3-223	ENST00000561071		K7ERI5	159 aa		7.68	□□□□□ -1.18
MARK3-223	ENST00000561071	PI15	O43692	258 aa		7.68	□□□□□ -1.18
MARK3-223	ENST00000561071	TH	P07101	528 aa		7.68	□□□□□ -1.18
MARK3-223	ENST00000561071	NPTX2	P47972	431 aa		7.68	□□□□□ -1.18
MARK3-223	ENST00000561071	TRAPPC10	P48553	1259 aa		7.68	□□□□□ -1.18
MARK3-223	ENST00000561071	PEX3	P56589	373 aa		7.68	□□□□□ -1.18
MARK3-223	ENST00000561071	NTHL1	P78549	312 aa		7.68	□□□□□ -1.18
MARK3-223	ENST00000561071	SRSF2	Q01130	221 aa	Known RBP	7.68	□□□□□ -1.18
MARK3-223	ENST00000561071	ORC2	Q13416	577 aa	Predicted RBP	7.68	□□□□□ -1.18
MARK3-223	ENST00000561071	TDG	Q13569	410 aa		7.68	□□□□□ -1.18
MARK3-223	ENST00000561071	PDIA5	Q14554	519 aa		7.68	□□□□□ -1.18
MARK3-223	ENST00000561071	PPP2R5A	Q15172	486 aa		7.68	□□□□□ -1.18
MARK3-223	ENST00000561071	TBR1	Q16650	682 aa		7.68	□□□□□ -1.18
MARK3-223	ENST00000561071	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	7.68	□□□□□ -1.18
MARK3-223	ENST00000561071	TOR2A	Q5JU69	321 aa		7.68	□□□□□ -1.18
MARK3-223	ENST00000561071	HAUS3	Q68CZ6	603 aa		7.68	□□□□□ -1.18
MARK3-223	ENST00000561071	C15orf39	Q6ZRI6	1047 aa		7.68	□□□□□ -1.18

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